MXO02911.5prime Sequence
856 bp (767 high quality bases) assembled on 2007-05-15
> MXO02911.5prime
CAGTCGACATGAGTCAAAAAACTGAAAGACCAGTGCTATCGGGTCAACGC
ATCAAGACCAGAAAAAGAGATGAAAGAGAAAAATATGACCCAACGGGATT
CCGTGATGCGGTCATTGCTGGTCTCGAAAAAACTGAAGGCGACCTGGAAC
AAATCTCTAAATATCTAGACAGCGCGGGCAACAAGCTCGACTATCGTCGC
TACGGTGAAGTTCTCTTTGACATATTGATTGCAGGAGGTCTACTAGTGCC
TGGTGGTTCTATATCTCAGGATGGCGAAAAGCCGCGCACAAGCTACTGCA
TCTTCGATGCGCCCGAGAGCATGGAGAGCATGCGCAACCATGAGCAGGTA
TTTGTCAAGCTCATCAGACGGTACAAGTACCTTGAGAAAATGTTCGAAGA
GGAGATGGGAAAGGTTCTATTATTCGTAAAGGGCTTTACTCCTAGTGAAC
GCATCAAGCTTGCGCGTATGACAGCGCTCTGGTTAGTCAACGGTTCTGTA
CCGCCAAATGTTTTACTGGTACTAAACAACGAGCACCTAATCAAGGATGG
CATTGCATTGGAGTTTCTACTAGAGCTGTTCCAGACGTTCAAGCAAGAGA
AGGGCATTGCATATCTGATTCAGGCGCTTAAGAAGGGTGGACTGGAAAGC
AAACTTATGGACTTTTTCCCACCGAACAAACGTACTGAGGAATATTTTAA
ACAAGTTTTTCTTGACAAAGAACTTAACGAGATCGTCAAGCTACATAAGG
CTCAGGCTAGCCAGGAGGCGAAGCGTGAGTTGCAGCAGGCGCTCATCGAT
GATATCAACGATGAGAAGCCATATAATGAGATAACCTCAGACATTAGGGA
CTTCTC
MXO02911.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:07:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2922-PG | 1269 | eIF-5C-RG | 1..848 | 9..856 | 4215 | 99.8 | Plus |
CG2922-PC | 1269 | eIF-5C-RC | 1..848 | 9..856 | 4215 | 99.8 | Plus |
CG2922-PF | 1269 | eIF-5C-RF | 1..848 | 9..856 | 4215 | 99.8 | Plus |
CG2922-PD | 1269 | eIF-5C-RD | 1..848 | 9..856 | 4215 | 99.8 | Plus |
CG2922-PB | 1269 | eIF-5C-RB | 1..848 | 9..856 | 4215 | 99.8 | Plus |
CG2922-PE | 1269 | eIF-5C-RE | 1..848 | 9..856 | 4215 | 99.8 | Plus |
CG2922-PA | 1269 | eIF-5C-RA | 1..848 | 9..856 | 4215 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
kra-RE | 1701 | CG2922-RE | 221..1068 | 9..856 | 4225 | 99.9 | Plus |
kra-RB | 1847 | CG2922-RB | 367..1214 | 9..856 | 4225 | 99.9 | Plus |
kra-RD | 2026 | CG2922-RD | 546..1393 | 9..856 | 4225 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5599116..5599353 | 246..9 | 1190 | 100 | Minus |
3R | 32079331 | 3R | 5597312..5597515 | 856..653 | 1005 | 99.5 | Minus |
3R | 32079331 | 3R | 5597772..5597939 | 652..485 | 840 | 100 | Minus |
3R | 32079331 | 3R | 5598204..5598345 | 486..345 | 710 | 100 | Minus |
3R | 32079331 | 3R | 5598942..5599046 | 349..245 | 525 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:14:32 has no hits.
MXO02911.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:07:59 Download gff for
MXO02911.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2922-PA | 1..848 | 9..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:03 Download gff for
MXO02911.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
exba-RD | 546..1393 | 9..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:36 Download gff for
MXO02911.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kra-RD | 546..1393 | 9..856 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:36 Download gff for
MXO02911.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5597312..5597515 | 653..856 | 99 | <- | Minus |
3R | 5597772..5597937 | 487..652 | 100 | <- | Minus |
3R | 5598204..5598342 | 348..486 | 100 | <- | Minus |
3R | 5598944..5599044 | 247..347 | 100 | <- | Minus |
3R | 5599116..5599353 | 9..246 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:03 Download gff for
MXO02911.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1423034..1423237 | 653..856 | 99 | <- | Minus |
arm_3R | 1423494..1423659 | 487..652 | 100 | <- | Minus |
arm_3R | 1423926..1424064 | 348..486 | 100 | <- | Minus |
arm_3R | 1424666..1424766 | 247..347 | 100 | <- | Minus |
arm_3R | 1424838..1425075 | 9..246 | 100 | | Minus |