MXO02914.5prime Sequence
520 bp (498 high quality bases) assembled on 2007-05-15
> MXO02914.5prime
CAATCGACATGATCATTAAAGCCCTACCGATCGTTTCGCTGTGCCTGGCC
AGCATTCAGGCCTCCAAGGTGGGAGCTCCGCAGTTGCCCAAGAAGCACCT
GGTCTGCTACTACGATTCCGCCAGTTTCGTCAAGGAAGGTCTGGGCAAGC
TGGTAATCGATGAACTGGAACCGGCTCTGCAATTCTGCGACTATCTGGTC
TACGGCTATGCCGGAATCGAGCGCGATTCGCACAAGGCGGTGAGTCTGAA
CCAGCAGTTGGATTTGGATTTGGGCAAGGGACTTTACCGCACGGTGACCC
GCTTGAAGCGCAAGTATCCCAATGTCAAGATCCTGCTGAGTGTGGGTGGT
GACAAGGACATTGAGCTGGACAAGGATGCCAAGGAGCTGCCCAACAAGTA
TCTCGAACTGCTCGAGAGCCCCACAGGTCGCACTCGTTTCGTGAATACCG
TCTACTCGCTGGTAAAGACCTACGGATTCGATGGCTTGGATGTCGCCTGG
CAGTTCCCCAAGAATAAGCC
MXO02914.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5210-PA | 1359 | Chit-RA | 1..512 | 9..520 | 2535 | 99.8 | Plus |
| CG1780-PA | 1329 | Idgf4-RA | 419..485 | 454..520 | 185 | 91 | Plus |
| CG1780-PB | 1329 | Idgf4-RB | 419..485 | 454..520 | 185 | 91 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5210-RB | 1811 | CG5210-RB | 340..851 | 9..520 | 2545 | 99.8 | Plus |
| CG5210-RA | 1541 | CG5210-RA | 70..581 | 9..520 | 2545 | 99.8 | Plus |
| Idgf4-RC | 1807 | CG1780-RC | 462..528 | 454..520 | 245 | 91 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16692346..16692729 | 137..520 | 1920 | 100 | Plus |
| 2R | 25286936 | 2R | 16691770..16691901 | 9..140 | 645 | 99.2 | Plus |
| X | 23542271 | X | 9929366..9929432 | 520..454 | 245 | 91 | Minus |
| 2L | 23513712 | 2L | 16449489..16449549 | 460..520 | 185 | 86.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:46:37 has no hits.
MXO02914.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:11 Download gff for
MXO02914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5210-PA | 1..512 | 9..520 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:44 Download gff for
MXO02914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5210-RA | 60..581 | 1..520 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:35 Download gff for
MXO02914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5210-RA | 60..581 | 1..520 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:35 Download gff for
MXO02914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16691760..16691899 | 1..138 | 96 | -> | Plus |
| 2R | 16692348..16692729 | 139..520 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:44 Download gff for
MXO02914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12579265..12579404 | 1..138 | 96 | -> | Plus |
| arm_2R | 12579853..12580234 | 139..520 | 100 | | Plus |
