MXO02925.5prime Sequence
792 bp (689 high quality bases) assembled on 2007-05-15
> MXO02925.5prime
CAGTCGACATGAAGATGGAAGTGCCCTCAGTACAAAATCACATTCAGGGA
AAATTCGGTGTTAATAAAATTAAAGACTGGCAAGCTTCTACGGCGCCGCT
GGAGGAGGAGGAGGAGCTGACCGCAGGCGTGAACGGGAACACAGCCGCCG
GCGAGGGCATTCTGGACGTCGACGTGGTAGATGGCCATCCAGCCTCTGTG
CTCCACATGCGACAGCACCAGGCGCTCAACACCCGCCCATCGGCCACGCC
TCCATCGGCAGGGGGCGGTGGTCCGTTGGCGGGCGGAGGATCCGTCGGTA
TGACCACTCCCAAACAGGCCACGTCGCCGGTGGCCGCGGCCAGTTTTGAG
GCGCCCCTTAGCGGTGGCAGTGCATCCGCCTATCCCCACGCCTACATGAC
CAACGTGCTGTCCAGCACCGCCCAGCAGCACCACCCACTGCCCGCATCGC
CGCTGCAGTCGACCGCCTGCGCTCGGTTTGGGGCCGCCGACAACTTGGAC
GATGTGAGCGCCAGCGCAGTGCGGGAACTGTCGCAGCAACTGCAGGCTCA
GCTACGGGATGCCAAGCGTCGCCACCTGGCCTGTACCGAGGTCACGCTGC
CCAACGACCTCACGCAGCGCATCGCCGCCGAGATCATCCGGATGTCGGAG
CGGGAACCATGCGGCGAGCGGGCCTGCACGCTCTTCATTGAGTTCGAGAG
CGAGCCCAACAAAGTCAAGCGCATTGCATACTTTAAAGTGGATCCGGACA
CGGTGTCCATCTTCGAGCTGTACTTGACATTGAGGCAGGACA
MXO02925.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7533-PC | 900 | chrb-RC | 1..784 | 9..792 | 3820 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chrb-RC | 5845 | CG7533-RC | 986..1769 | 9..792 | 3860 | 99.5 | Plus |
| chrb-RE | 4908 | CG7533-RE | 114..832 | 74..792 | 3550 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11494088..11494733 | 74..719 | 3185 | 99.5 | Plus |
| 3L | 28110227 | 3L | 11494846..11494919 | 719..792 | 370 | 100 | Plus |
| 3L | 28110227 | 3L | 11488535..11488601 | 9..75 | 320 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:04 has no hits.
MXO02925.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:25 Download gff for
MXO02925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7533-PC | 1..783 | 9..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:06 Download gff for
MXO02925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chrb-RC | 983..1768 | 4..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:11 Download gff for
MXO02925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chrb-RC | 983..1768 | 4..791 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:11 Download gff for
MXO02925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11494846..11494918 | 719..791 | 100 | | Plus |
| 3L | 11488532..11488601 | 4..75 | 94 | -> | Plus |
| 3L | 11494090..11494732 | 76..718 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:06 Download gff for
MXO02925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11481632..11481701 | 4..75 | 94 | -> | Plus |
| arm_3L | 11487190..11487832 | 76..718 | 99 | -> | Plus |
| arm_3L | 11487946..11488018 | 719..791 | 100 | | Plus |
