MXO02927.5prime Sequence
808 bp (734 high quality bases) assembled on 2007-05-15
> MXO02927.5prime
CAGTCGACATGTTTGATGTCTTTGGGTCCGTCAAGGGCCTGCTGAAGATC
GACCAGGTGTGCATCGACAACAATGTCTTTCGCATGCACTACAAGGCCAC
GGTGATCATACTGATCGCCTTCTCCCTCCTGGTGACCTCGCGCCAATACA
TCGGTGACCCCATCGATTGTATTGTGGACGAGATCCCACTGGGCGTGATG
GACACCTACTGCTGGATCTACTCTACGTTTACCGTGCCAGAGAGGCTAAC
GGGCATCACCGGACGCGATGTGGTGCAGCCCGGCGTGGGCTCCCATGTGG
AGGGCGAGGACGAGGTGAAGTACCACAAGTACTACCAGTGGGTGTGCTTC
GTCCTCTTCTTCCAGGCCATCCTGTTCTACGTACCGCGCTATCTGTGGAA
GTCCTGGGAAGGCGGACGCCTCAAGATGCTGGTCATGGATCTCAACAGCC
CTATTGTGAACGATGAGTGCAAGAACGATCGCAAAAAGATCCTGGTCGAC
TACTTCATTGGCAACCTGAACCGCCACAATTTCTACGCCTTCCGATTCTT
CGTGTGCGAAGCCCTGAACTTTGTGAATGTGATTGGACAGATCTACTTTG
TGGACTTCTTCCTCGACGGCGAGTTCAGCACCTACGGCAGTGATGTCTTG
AAGTTCACTGAGCTGGAGCCGGATGAGCGCATTGATCCCATGGCGCGGGT
CTTTCCGAAGGTCACCAAATGCACGTTCCACAAATACGGTCCATCCGGCA
GTGTGCAGACCCACGACGGTCTGTGCGTGCTGCCCCTGAACATTGTCCAC
GAAAAGAT
MXO02927.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4590-PA | 1104 | inx2-RA | 1..800 | 9..808 | 3975 | 99.8 | Plus |
| CG4590-PB | 1104 | inx2-RB | 1..800 | 9..808 | 3975 | 99.8 | Plus |
| CG3039-PA | 1089 | ogre-RA | 322..362 | 330..370 | 155 | 95.1 | Plus |
| CG3039-PB | 1089 | ogre-RB | 322..362 | 330..370 | 155 | 95.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Inx2-RD | 5266 | CG4590-RD | 244..1043 | 9..808 | 3985 | 99.9 | Plus |
| Inx2-RC | 1832 | CG4590-RC | 458..1257 | 9..808 | 3985 | 99.9 | Plus |
| Inx2-RB | 2758 | CG4590-RB | 244..1043 | 9..808 | 3985 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6999129..6999928 | 9..808 | 3985 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:56:27 has no hits.
MXO02927.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:37 Download gff for
MXO02927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4590-PB | 1..800 | 9..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:31 Download gff for
MXO02927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inx2-RB | 236..1043 | 1..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:35 Download gff for
MXO02927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inx2-RB | 236..1043 | 1..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:35 Download gff for
MXO02927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6999121..6999928 | 1..808 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:31 Download gff for
MXO02927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6893154..6893961 | 1..808 | 99 | | Plus |
