MXO02928.5prime Sequence
692 bp (377 high quality bases) assembled on 2007-05-15
> MXO02928.5prime
CAGTCGACATGTCGCTATCAAGCCTCCTGCCCGCGCCGACGAACGCGATC
TGGGATCGGGAGGACGAGCGTCGCCTGGTCGCCCGCGGAGCACCAAAGAT
CGGAGCCCTGGTCTCCGCCAAAATCGCTGCTCCGCCGTACGGACAGCGTA
AGGATTGGGTACCACATACGGATGCGGACTTTGGCGATGGCGGCGCCTTC
CCGGAGATCCATGTGGCGCAATATCCACTAGGTCTGGGAGCACCAGGAAA
TGTTGGCAAGAAGTCGGATGCTCTGGCCGTTCGCCTGGACGACAAGGGAA
AGGTTAAATACGATGCCATAGCACGCCAAGGACATGGCAAGGACAAGATT
GTGTACTCGTCCATTTCGCAACTGCTGCCGGTGGAGGTGTTGGCCGAAGA
TGCGGATGAACTACAGCGCCCGGACGAGGAAACGGTGATGGAGACGACGG
AGGAGACGCGCCTGGAGCTGGAGAAGCTGACCAACCAGAAGATCACCTCA
GCGCTGCCCGTGCGCCATGCCCAGAAGGCGGGTCCCGCCCAGTACATTCG
GTACACGCCCTCGCAGCAGGGCGATACCTTCAATTCGGGCGCCAAGCAGC
GTGTCATCCGGATGGAGGAGGCGCAGCTCGATCCGATGGAGCCGCCCACG
TTCCGCTTTAACAAAAAGATTCCGAGAGGTCCACCATCGCCG
MXO02928.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:08:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8264-PA | 1644 | Bx42-RA | 1..684 | 9..692 | 3195 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bx42-RB | 2403 | CG8264-RB | 158..841 | 9..692 | 3285 | 98.7 | Plus |
| Bx42-RA | 1955 | CG8264-RA | 158..841 | 9..692 | 3285 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9105497..9105959 | 692..230 | 2210 | 98.5 | Minus |
| X | 23542271 | X | 9106223..9106447 | 233..9 | 1095 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:41:20 has no hits.
MXO02928.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:08:33 Download gff for
MXO02928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8264-PA | 1..684 | 9..692 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:10 Download gff for
MXO02928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bx42-RA | 154..841 | 2..692 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:59 Download gff for
MXO02928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bx42-RA | 154..841 | 2..692 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:59 Download gff for
MXO02928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9105497..9105957 | 232..692 | 98 | <- | Minus |
| X | 9106225..9106451 | 2..231 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:10 Download gff for
MXO02928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8999530..8999990 | 232..692 | 98 | <- | Minus |
| arm_X | 9000258..9000484 | 2..231 | 97 | | Minus |
