MXO02930.5prime Sequence
713 bp (626 high quality bases) assembled on 2007-05-15
> MXO02930.5prime
CAGTCGACATGGAACGTGGCGGTTATGGTGGTGGTTCGGGACAGGGATAT
AATAATTTCGCTGTCCCCCCACCAAATTACCAGCAAATGCCAAATAAAAC
GGGTAACTACAACGAGCCACCTCCGAACTACGGCAAACAAGGCGGTGGTT
ATGATTCCGGTTCCGGTCATCGTGGTTCTGGTGGCAGCGGCAACGGTGGC
GGCGGCGGCGGATCATGGAACGACAGAGGAGGCAATTCCTACGGAAATGG
AGGCGCCAGCAAGGACAGCTACAACAAAGGACACGGAGGATACTCGGGCG
GCGGCGGTGGTGGTGGAGGAGGCGGCGGCGGTGGGTCCGGTGGCAACGAC
ATGATCACCCAGGAGGACACCATCTTTGTCTCCGGCATGGATCCCTCAAC
CACCGAGCAGGACATTGAGACACACTTTGGAGCAATTGGCATCATCAAGA
AAGACAAGCGTACAATGAAGCCCAAGATTTGGCTGTACAAGAACAAGGAG
ACCGGCGCCTCCAAGGGAGAGGCCACTGTCACCTACGACGACACCAATGC
TGCACAATCCGCCATTGAATGGTTCGATGGACGCGACTTCAACGGCAATG
CGATCAAGGTGTCGCTGGCCCAGCGCCAGAACAACTGGAACAAGGGCGGA
GGCGGCGGCGGCGGTGGTGGTGGTCGCGGAGGATTTGGCGGACGTCTCGG
TGGTGGTGGCGGC
MXO02930.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:08:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3606-PB | 1200 | caz-RB | 1..705 | 9..713 | 3475 | 99.7 | Plus |
| CG3606-PA | 1200 | caz-RA | 1..441 | 9..449 | 2180 | 99.7 | Plus |
| CG3606-PA | 1200 | caz-RA | 446..705 | 454..713 | 1275 | 99.6 | Plus |
| CG3606-PB | 1200 | caz-RB | 1051..1079 | 645..673 | 145 | 100 | Plus |
| CG3606-PA | 1200 | caz-RA | 1051..1079 | 645..673 | 145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| caz-RB | 1666 | CG3606-RB | 140..846 | 7..713 | 3505 | 99.7 | Plus |
| caz-RC | 1621 | CG3606-RC | 235..801 | 147..713 | 2805 | 99.6 | Plus |
| caz-RD | 1534 | CG3606-RD | 149..714 | 148..713 | 2800 | 99.6 | Plus |
| caz-RC | 1621 | CG3606-RC | 140..237 | 7..104 | 490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16292193..16292458 | 448..713 | 1315 | 99.6 | Plus |
| X | 23542271 | X | 16291939..16292110 | 278..449 | 845 | 99.4 | Plus |
| X | 23542271 | X | 16289027..16289160 | 16..149 | 670 | 100 | Plus |
| X | 23542271 | X | 16289225..16289322 | 147..244 | 490 | 100 | Plus |
| X | 23542271 | X | 16291056..16291092 | 244..280 | 185 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:14:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 622..728 | 412..524 | 119 | 59.3 | Plus |
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 9139..9245 | 412..524 | 119 | 59.3 | Plus |
MXO02930.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:08:43 Download gff for
MXO02930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3606-PB | 1..705 | 9..713 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:12 Download gff for
MXO02930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| caz-RB | 134..846 | 1..713 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:45 Download gff for
MXO02930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| caz-RB | 134..846 | 1..713 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:45 Download gff for
MXO02930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16289027..16289158 | 16..147 | 100 | -> | Plus |
| X | 16289226..16289322 | 148..244 | 100 | -> | Plus |
| X | 16291057..16291091 | 245..279 | 100 | -> | Plus |
| X | 16291941..16292110 | 280..449 | 99 | -> | Plus |
| X | 16292195..16292458 | 450..713 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:12 Download gff for
MXO02930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16185090..16185124 | 245..279 | 100 | -> | Plus |
| arm_X | 16183060..16183191 | 16..147 | 100 | -> | Plus |
| arm_X | 16183259..16183355 | 148..244 | 100 | -> | Plus |
| arm_X | 16185974..16186143 | 280..449 | 99 | -> | Plus |
| arm_X | 16186228..16186491 | 450..713 | 99 | | Plus |
