MXO02931.5prime Sequence
813 bp (700 high quality bases) assembled on 2007-05-15
> MXO02931.5prime
CAGTCGACATGAGCATGCTGTTGCGACGCAATTCCAGCCAGCTGCGGCTA
CTTCTCTCCTCCGCCGCTCAGGCCACGCGCCTGGCATCCAGCGGAGTGGA
GCCACCATCTGCTGGACAGCAGGAGATTAAAAAGCAGAGGCGCCAGCCAC
CGCCCGTGGTTCCCGATTCGGAGATCAAGAAGTCCGTGTTCATCTCGCAG
TCCAGCGATGTGTTCACCAACCTCGCTCTAGAGGATTGGCTGTACAAAAA
CTTTGATTTCAGCCGCCACCATGTGCTGCTGCTGTGGGCCAACGACCCGT
GCGTAGTCATTGGTCGCCACCAGAATCCCTTCACCGAGGCTAATGTTTCG
CAGCTGGTGGAACGCGGCATAACACTTGCACGCCGCAATAGTGGCGGTGG
AGCGGTGTACCATGATCTTGGGAACCTCAACTGCACCTTTTTCTCGCCCA
GAGAGCGCTACGATCGCAAGTACAACCTGAACATCGTGACCAGGGCCTTG
TTCCGCGAATGGGCCATCAAGGCAGAGATAAATGAGCGCGACGACATTGT
AGTGATGAATAAGAAGATTTCCGGCACTGCGGCCAAGCTGGGACACCCGA
ACTCGTACCATCACTGCACCATTTTGGCCAGCGCCAACAAATTGCACTTG
GGCGAATCTCTGGTGCGGGAGCCGGCCAATTATATTAGCAAGGCCACGGC
TTCGGTGCCGTCGCCCATTCGCAACCTGGTTGATGTCAATCGCACGGTGA
ACGTTGCTCAGCTGCGTTCCGCCGTGGGTTACGAGTATTTGAGAACGGCT
GCAACTACGCTTG
MXO02931.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8446-PA | 1191 | CG8446-RA | 1..805 | 9..813 | 4025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44243-RB | 2010 | CG44243-RB | 441..1246 | 8..813 | 4030 | 100 | Plus |
| CG44243-RA | 2131 | CG44243-RA | 739..1544 | 8..813 | 4030 | 100 | Plus |
| CG42837-RA | 2131 | CG42837-RA | 739..1544 | 8..813 | 4030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16197780..16198338 | 8..566 | 2795 | 100 | Plus |
| 2R | 25286936 | 2R | 16198483..16198731 | 565..813 | 1245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:15:52 has no hits.
MXO02931.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:29 Download gff for
MXO02931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8446-PA | 1..805 | 9..813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:44 Download gff for
MXO02931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44243-RA | 735..1544 | 1..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:09 Download gff for
MXO02931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42837-RA | 735..1544 | 1..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:09 Download gff for
MXO02931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16197776..16198338 | 1..566 | 99 | -> | Plus |
| 2R | 16198485..16198731 | 567..813 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:44 Download gff for
MXO02931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12085281..12085843 | 1..566 | 99 | -> | Plus |
| arm_2R | 12085990..12086236 | 567..813 | 100 | | Plus |
