MXO02934.5prime Sequence
784 bp (696 high quality bases) assembled on 2007-05-15
> MXO02934.5prime
CAGTCGACATGGCCAAACAAGTGGCTGATTACCAGTGCAGTAAGCTCCAG
TTGTACCAAAAGCTGGCACTGGTCGTAATCCTGGGAGCAGTGCTTTTCTC
GCTCCCGGCGTTGTGCGCCGGCCAGGGCAATCCCAGTTTCAAATACTCGC
GGGAAGCCAACGAAAACTTCGATCCGCAGAAGGCTCCACGGGCGGAGCAC
CATCATCATCATGATCATGACCACGATCATGGACACCACCACCACGGGCA
CGATCATGATCATGACCACGACCACGGGCATGATCATGGACACCATCATC
ACGGGCACGATCATGATCATGACCACGACCACGGACACCATCATCACGGG
CACGATGAAAGGCACACCAAGGCAAAGCCGGATTTGGATATGAGCACCAT
TTGGTTGCACTCGATCGGCTCAACTCTTCTTATCAGTGCCGCTCCCTTCG
TGCTGCTGTATATCATTCCCCTAGACAACAGTGAGGCGATGAAGCCGCGT
CTCAAAGTGCTTCTGGCCTTTGCTTCTGGCGGTTTGTTGGGTGATGCCTT
TCTGCACTTGATTCCTCATGCCACGCATCCACACAGTCATGGAGAACACG
GCCACGATCACGGCCATGATCACCATCATCATCATGATGGCGAGGAGCAT
GAACATGGTCACAGCCACGATATGAGCATTGGTCTGTGGGTCCTTGGAGG
AATCATTGCCTTCCTTTCAGTGGAGAAACTGGTACGCATTCTAAAGGGCG
GTCATGGAGGACACGGCCACAGCCATGGAGCACC
MXO02934.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:08:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10449-PA | 1350 | Catsup-RA | 1..776 | 9..784 | 3880 | 100 | Plus |
| CG15022-PA | 888 | CG15022-RA | 87..113 | 602..628 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Catsup-RA | 1698 | CG10449-RA | 85..860 | 9..784 | 3880 | 100 | Plus |
| Catsup-RA | 1698 | CG10449-RA | 273..363 | 248..344 | 250 | 84.5 | Plus |
| Catsup-RA | 1698 | CG10449-RA | 324..420 | 197..287 | 250 | 84.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19042379..19042776 | 387..784 | 1990 | 100 | Plus |
| 2L | 23513712 | 2L | 19041946..19042324 | 9..387 | 1895 | 100 | Plus |
| 2L | 23513712 | 2L | 19042162..19042224 | 282..344 | 240 | 92.1 | Plus |
| 2L | 23513712 | 2L | 19042219..19042281 | 225..287 | 240 | 92.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:37:00 has no hits.
MXO02934.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:08:38 Download gff for
MXO02934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10449-PA | 1..776 | 9..784 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:01 Download gff for
MXO02934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Catsup-RA | 85..860 | 9..784 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:16 Download gff for
MXO02934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Catsup-RA | 85..860 | 9..784 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:16 Download gff for
MXO02934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19041946..19042324 | 9..387 | 100 | -> | Plus |
| 2L | 19042380..19042776 | 388..784 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:01 Download gff for
MXO02934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19041946..19042324 | 9..387 | 100 | -> | Plus |
| arm_2L | 19042380..19042776 | 388..784 | 100 | | Plus |
