MXO02937.5prime Sequence
702 bp (702 high quality bases) assembled on 2007-05-15
> MXO02937.5prime
CAGTCGACATGTCCGACGAGACGACCCCCGCGGTGTGGGATGACTCCTTG
CTGGTGAAGACGTACGACGAGTCGGTGGGACTGGCCCGCGAAGCTTTGGC
CCGCCGCCTCGCCGATTCCACCAACAAGCGCGAGGAGGAGAACGCTGCCG
CAGCTGAAGAAGAAGCTGGCGAGATCTCGGCCACTGGTGGGGCTACCAGC
CCGGAACCAGTATCCTTCAAAGTAGGCGACTACGCCAGGGCCACCTACGT
GGATGGTGTGGACTACGAGGGCGCTGTGGTGTCTATTAACGAGGAGAAGG
GCACCTGCGTACTCCGCTATTTGGGCTATGAGAACGAGCAGGAGGTGTTG
CTCGTGGACCTCCTGCCGTCCTGGGGCATGCGTGTGCGTCGCGAGCAGTT
CCTTATCGCCAAGAAGGATGAGGACGAGCAGTTGAGCCGCCCTAAGGCAT
CCGCTGGTAGTCATTCAAAGACTCCCAAGTCATCCAGAAGGAGTAGGATC
TCTGGCGGACTGGTTATGCCGCCCATGCCACCAGTACCGCCCATGATTGT
CGGACAAGGGGACGGCGCCGAACAGGACTTCGTGGCCATGCTCACCGCCT
GGTACATGTCCGGCTATTATACGGGCCTCTACCAGGGAAAGAAAGAAGCC
AGCACCACTAGCGGAAAGAAAAAGACACCCAAGAAGGCAAGCTTTCTAGA
CC
MXO02937.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16725-PA | 681 | Smn-RA | 1..678 | 9..686 | 3315 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Smn-RB | 1086 | CG16725-RB | 298..979 | 5..686 | 3350 | 99.4 | Plus |
| Smn-RA | 879 | CG16725-RA | 91..772 | 5..686 | 3350 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16580505..16581186 | 686..5 | 3350 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:41:05 has no hits.
MXO02937.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:47 Download gff for
MXO02937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16725-PA | 1..681 | 9..690 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:01 Download gff for
MXO02937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Smn-RA | 87..777 | 1..694 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:52 Download gff for
MXO02937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Smn-RA | 87..777 | 1..694 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:52 Download gff for
MXO02937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16580500..16581189 | 1..694 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:01 Download gff for
MXO02937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16573600..16574289 | 1..694 | 98 | | Minus |
