MXO02938.5prime Sequence
834 bp (787 high quality bases) assembled on 2007-05-15
> MXO02938.5prime
CAGTCGACATGAGCGGTTCCGTATCGAGTTTGGCGCGTCCTGCAGCAGCC
ACAAATGGCCATAATCTGCTGACCAAACAGCTGAATTGCAATGGCAATGG
CACCACCGGTGGCGCGGCGAAAACCACTGTGGCCTCGGCCATAACACCGC
CCAAGCAGCCCCAGTTGGCGGCCAAGGTCATCCAGCAGTCGCAGATCGTC
TGTTTCGATGTGGACTCCACGGTGATTTGCGAGGAGGGCATCGACGAACT
GGCCGAATATTGTGGCAAGGGGAGCGAGGTGGCTCGCGTTACCAAGGAGG
CGATGGGCGGTGCCATGACCTTCCAGGATGCCCTCAAAATTCGCTTGAAC
ATCATACGGCCGACACAGCAGCAAGTGAGGGATTTCATCCAGGAGCGACC
CAGTACACTGAGCAAAAACGTGAAGCGTTTCGTCAGCCATTTGAAGGCGG
AGGGAAAACAGGTTTACTTGATCTCCGGCGGATTCGATTGCCTAATTGCG
CCCGTGGCCAATGAATTGGGTATTCCCCTGAAAAACGTCTATGCCAACAA
GATGCTGTTCGATTATTTGGGCGAATACGATAGCTTTGATATCAACCAGC
CCACTTCGCGTTCCGGCGGAAAGGCAGAGGCTATCGCCCTGATAAGGAAG
GAGAATAGCGACGATTCCCTAATCACCATGATCGGCGATGGAGCCACCGA
TCTGGAGGCCGTACCGCCAGCCAACTACTTTATAGGTTTCGGTGGCAATG
TCGTGCGGCCGGAGGTCTATCGCCGTGCACAGTATTACGTAACGGATTTT
GAGCAGCTGATGGGGCAAGCAAGCTTTCTAAACC
MXO02938.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3705-PA | 813 | aay-RA | 1..809 | 9..817 | 4020 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aay-RA | 1529 | CG3705-RA | 292..1106 | 3..817 | 4045 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9423544..9424358 | 3..817 | 4045 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:25:15 has no hits.
MXO02938.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:05:54 Download gff for
MXO02938.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3705-PA | 1..813 | 9..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:59 Download gff for
MXO02938.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 290..1111 | 1..823 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:37 Download gff for
MXO02938.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aay-RA | 290..1111 | 1..823 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:37 Download gff for
MXO02938.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9423542..9424358 | 1..817 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:59 Download gff for
MXO02938.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9416642..9417458 | 1..817 | 99 | -> | Plus |
