MXO02945.5prime Sequence
866 bp (612 high quality bases) assembled on 2007-05-15
> MXO02945.5prime
CAGTCGACATGTTCACCTACCAACTGGGGCTTGTGGTCCGCTGTGCGCGG
CAGAAGCCGCTGCTCCTATGGGCGCCCGCCTGCCACATGAGCGGTCTCAG
TCCGCTGAAGGAATATGAGAAGCGTGTTAGTTCTGGCCAACTGATGACCG
ACAACGGGCAGCTGCAGACGATGAAGGAGCTGGATGCGCTGTACCACAAG
ATTCAGGGGTATAAACCCAGCTACAGGGCGGGCGGTGGCGGCGGAGGATT
CTTCAGTTCAATCTTTGGTAGGAAATCTTCCACCGAAGATGACGATCAGG
ATGATCCTAACGCTGGCAGTCACGCTCCTCAGGGTCTGTACCTGTACGGC
GGCGTGGGTGTGGGCAAGACCACTCTGATGGACCTGTTCTTCGACTGCTG
TACCCAAATTCATCAAAAGCAGCGCGTCCATTTTACTTCGTTCATGAACA
CCGTGCACACCCGCATCCACGAGGCCAAGCAGAGACAAGGACCTGTTGAC
CGTGCCTTTAATTCTGAAAAACCAGCACCATTTGATCCCACAAAACCGGT
TGCTGACCTGATTGCCAGTGAGTCCTGTTTGATTTGCTTCGATGAATTTC
AGGTGACGGACATAGCCGACGCCATGGTGCTAAAGAGATTGTTTACGCAC
CTTTTCCGCCATGGCATTGTGGATGTGGCCACCAGCAATCGGCATCCAGA
GGATCTGTACAAGAACGGACTGCAGCGCACGAACTTTCTGCCCTTCATTG
CGTTACTTCAGCGTCGCTGTAAGGTGTCCCAGTTGGATTCTATTGACTAC
CAACGTATAGCCCAATCTGGTGACACCAACTACTTGGTCAAAGGCCCACG
GATGCGGACGGCACTA
MXO02945.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:06:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8520-PA | 1377 | CG8520-RA | 1..838 | 9..846 | 4015 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8520-RB | 1734 | CG8520-RB | 150..1005 | 9..863 | 4135 | 98.9 | Plus |
| CG8520-RA | 2134 | CG8520-RA | 550..1405 | 9..863 | 4135 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12424166..12424622 | 408..863 | 2145 | 98.5 | Plus |
| 2R | 25286936 | 2R | 12423710..12424108 | 9..407 | 1965 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:34:08 has no hits.
MXO02945.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:06:07 Download gff for
MXO02945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8520-PA | 1..858 | 9..865 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:28:57 Download gff for
MXO02945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8520-RA | 541..1407 | 1..865 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:22 Download gff for
MXO02945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8520-RA | 541..1407 | 1..865 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:22 Download gff for
MXO02945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12423701..12424108 | 1..407 | 98 | -> | Plus |
| 2R | 12424166..12424624 | 408..865 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:28:57 Download gff for
MXO02945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8311206..8311613 | 1..407 | 98 | -> | Plus |
| arm_2R | 8311671..8312129 | 408..865 | 98 | | Plus |
