MXO02949.5prime Sequence
781 bp (734 high quality bases) assembled on 2007-05-15
> MXO02949.5prime
CAGTCGACATGCATCCCGATCTCACGGAGCGCATTCTCCAGCATTTGGAG
ACCACCGACAAGGCGGACACACTGGACCTGGCCGCACTCTTTGCCGAGGA
TCACCAGAAGATTGTGGGCTCATTGAAGAGCATACAGGCGCATGGCGAAC
TAGTCACCGCGGAAACGGTCACCCACAAGAGTTTGGGCCTCACAGACGAG
GGTCGCGCCGTCGTGGAGAATGGCAGTCATGAGGCACTGGTCTACGACCT
AGTTCCGCCGGAGGGAATCGCCCAGGCGGCTCTAATGGCAGCCGGTGGCG
CAAATGCCAAAGTGGGCTTTAGCAAAGCCATGTCGCACGGCTGGATTTTG
GTGGACAAGAGCGTCACGCCGCCGCTGGTGCGCCGCAAGGTGGACACCAT
TACGGATGTGGTGCGCAATCAACTGCAGCAGGTGGCGCTGGGAAAGGGTG
ACCAGCTGCCTGCCAAGGAGGTGGCCGACTTCAAGAAACGCAAGCTCCTC
CAGGAAACGACCACCAAGAGCTTCGTGCTGGCACGCGGCCCTGAATTTGC
CACCACTCTCACCAAGTTGGAGACGGATCTCACGGTGGAAATGCTCGCAA
ATGGATTGTGGGACCAGCTCAAGTTCAAGGCCTATAACTTTGATGCGTTG
GGTGCACCACCAACGCGTGGACATCTCCATCCCTTGCTCAAAGTGCGCAC
TGAGTTCCGGCAGATATTCCTCGAGATGGGCTTCTCAGAGATGCCTACGA
ACAACTATGTGGAATCGTCATTCTGGAACTT
MXO02949.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:06:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2263-PA | 1497 | CG2263-RA | 1..773 | 9..781 | 3865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2263-RA | 1699 | CG2263-RA | 108..880 | 9..781 | 3865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8144723..8145495 | 781..9 | 3865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:09:29 has no hits.
MXO02949.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:06:11 Download gff for
MXO02949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2263-PA | 1..773 | 9..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:12 Download gff for
MXO02949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2263-RA | 103..880 | 1..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:18 Download gff for
MXO02949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2263-RA | 103..880 | 1..781 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:18 Download gff for
MXO02949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8144723..8145500 | 1..781 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:12 Download gff for
MXO02949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8038756..8039533 | 1..781 | 99 | | Minus |
