MXO02952.5prime Sequence
816 bp (780 high quality bases) assembled on 2007-05-15
> MXO02952.5prime
CAGTCGACATGAACGAGAAAATCGTGCGGGAGCAGCGCGGCGGCGAAGAT
TCCCCATCCTCCGTCTCGGCGAAAAGTGCAACGGCAGCGGCGTCAGCGTC
GACAGCGTCGATGACGTTTGCCTCGGCGGCCTTGGAATCGCACAAGACGA
CCACCATCACGACCGCCAGCAGCAGCCCTCGCACCAGTGGAGCAAGTGCA
TCCGCCTCGTCATCCTCTCGATCCGCATCTGCACCTGCATCGTCGTCCAG
CCAGCAGGAAAAGCAACCGATGCTGAATGCCACCGATATGCGCGAACTGC
GCGAAATCAAGCAGTTGCTGTGGGGCGACAATGTGCGCGAAGATGTATTC
AAGCGTTGGTCTCAAGGATTCGAGTTTAGTAAAGTGGAACCGTCTGCATT
GGTGCAGAAGCAGGGCGGTCCTTGTGCTGTGATAGCGCCGGTGCAGGCGT
ACTTGCTTAAGATTATTATCATGGACTTGCCAGGCATCAAGCTCTCGGAG
ATTTCCCTCGACAAATCGCAGAACCTGCTGATCCAGGCATTGTGTGACAT
CCTGAAGAATTGTCGGGCGCCGCGGTACCGCATCGTCCATCTCTTGCGCC
GACGAGGAAACGCTACAGAGGCTGGATCAACCAAAAAGCGCTCACCGGCT
GGCGAGGAAGAATCTGCTTTAGCTGGCCAAGCGGCAGGATCTTCCGAAGA
GGTGGAGGAGGCGGCAGAAGCCACTCCCGCCTCGGTCAGCAAGTTGTCCC
AGGCCCTGCAGCTCGAACACGATATGCACCAGGAACTGTCGCCGGATGAG
TTCCACGAGCGCCTGC
MXO02952.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7332-PA | 1683 | CG7332-RA | 1..808 | 9..816 | 4040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7332-RB | 3401 | CG7332-RB | 305..1112 | 9..816 | 4040 | 100 | Plus |
| CG7332-RA | 2146 | CG7332-RA | 305..1112 | 9..816 | 4040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18884817..18885175 | 9..367 | 1795 | 100 | Plus |
| X | 23542271 | X | 18886018..18886335 | 499..816 | 1590 | 100 | Plus |
| X | 23542271 | X | 18885827..18885962 | 365..500 | 680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:26:50 has no hits.
MXO02952.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:06 Download gff for
MXO02952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7332-PA | 1..808 | 9..816 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:56 Download gff for
MXO02952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7332-RA | 297..1112 | 1..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:00 Download gff for
MXO02952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7332-RA | 297..1112 | 1..816 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:00 Download gff for
MXO02952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18884809..18885174 | 1..366 | 99 | -> | Plus |
| X | 18885829..18885962 | 367..500 | 100 | -> | Plus |
| X | 18886020..18886335 | 501..816 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:56 Download gff for
MXO02952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18778842..18779207 | 1..366 | 99 | -> | Plus |
| arm_X | 18779862..18779995 | 367..500 | 100 | -> | Plus |
| arm_X | 18780053..18780368 | 501..816 | 100 | | Plus |
