MXO02953.5prime Sequence
819 bp (773 high quality bases) assembled on 2007-05-15
> MXO02953.5prime
CAGTCGACATGGCTTTATCCGTTCCCCATGCTCCCGGTGTGTCGCAGATG
CTGAAGGATGGCGCCCGGATGTACAGTGGGCTGGAGGAGGCGGTGTTCCG
CAACATCAGCGCCTGCAAGGAGTTTGCACAGACCATGCGCTCTGCCTATG
GGCCAAATGGCATGAACAAGATGATCATCAATCACATCGAGAAGCAGTTC
GTGACCAGCGATGCCGGCACCATCATGCGGGAGCTGGATGTTGAGCATCC
AGCCGCCAAGTTGATCGTCATGGCCAGCCAGATGCAGGATGCCGAGGTGG
GCGATGGTACAAACTTCGTGGTGGTGCTGGCCGGAGCTCTGTTGGAGTCC
GCTGAGGAGCTGCTGCGTCTAGGAATCACCTTTGCCGACATCTCCGACGG
CTATGAAAAGGCCTTGGAGAAGGCTCTGGAGATTCTGCCCAATCTGGTGA
GCCACAAGATCGAGGACTATCGCAATGTGGAGAAGGTCAAGGAGGTACTC
CGCACATCGATCATGTCGAAGCAGTACGGCCAGGAGGACTTCCTCAACGA
TTTGGTGAGCAAGGCCTGCGTCTCCATCTTGCCGGATGAGGGCACCTTCA
ACGTGGACAACATTCGCATCTGTAAGATCTTGGGCAGCGGACTGACCAAG
TCTGAGGTGGTTCGCGGCATGGTCTTCAAGCGCTTCGTAGAAGGCGATGT
GACCTATGCAGAGAAGGCCAAGATCGTGATTTTCTCCTGCCCCGTCGATA
TTATCCAAACTGAGACCAAGGGCACAGTGCTGATCAAGTCGGCCGACGAG
CTATTGAGCTTTTCCTCCG
MXO02953.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8258-PA | 1641 | CG8258-RA | 1..811 | 9..819 | 3930 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8258-RA | 1904 | CG8258-RA | 79..889 | 9..819 | 3980 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8905923..8906674 | 819..68 | 3715 | 99.6 | Minus |
| 2R | 25286936 | 2R | 8906853..8906912 | 68..9 | 270 | 96.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:31:47 has no hits.
MXO02953.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:15 Download gff for
MXO02953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8258-PA | 1..811 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:38 Download gff for
MXO02953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8258-RA | 79..889 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:42 Download gff for
MXO02953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8258-RA | 79..889 | 9..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:42 Download gff for
MXO02953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8905923..8906673 | 69..819 | 99 | <- | Minus |
| 2R | 8906853..8906912 | 9..68 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:38 Download gff for
MXO02953.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4793428..4794178 | 69..819 | 99 | <- | Minus |
| arm_2R | 4794358..4794417 | 9..68 | 96 | | Minus |
