MXO02962.5prime Sequence
786 bp (770 high quality bases) assembled on 2007-05-15
> MXO02962.5prime
CAGTCGACATGCGGACGCACGGACTACGGTTGGTGCTCTTGGCCCTGCTG
CCCACGATGGCCCTGGGCCTGCTAGAGGGCCTGTACTGTGGCAAGGAAAA
CTGTTACGACGTGCTGGGCGTCACCAGAGAGTCGTCCAAGTCGGAGATCG
GCAAAGCATACCGCCAGCTGGCGAGGCGCTATCATCCAGATCTGCATCGG
GGTGCCGAGGCCAAGGCGGCGGCGGAGACGCAGTTTAAGCTGGTGGCCAC
CGCCTACGAGATCCTGCGCGATGAGGAGTCGCGCACGGACTACGATTACA
TGCTGGACAACCCGGATGCATACTATGCGCATTACTATCGCTACTACCGG
CGACGCGTGGCGCCCAAGGTGGATGTGCGCGTGGTTATCGTGGTCGTCCT
AACCATTGTGTCCGTCATCCAGTACTATTCCGGCTGGCAGCGCTACGATT
CTGCCATCAAGTACTTTGCCACGGTGCCCAAGTATAGGAACCAGGCCCTG
GAAATAGCTCGCGACGAGATCCAGGAAAAGATCCAGAAGAAGGGCAAGAA
TCGTATGTCCAAGAACGATCAGCGCGATGAGCTGGAACGGATCATCCGGC
GGGTGATCGAGGAGAAGATGGACGTTAAGGGCGGCTATGCGAAGCCGACA
CTCTGGGATGTGCTGTGGGTGCAGCTGATCATCTGCCCCTACACGATACT
CTCGTTCATCGTGTGGCACGCTCAGTGGTTCTGGCGCTACACGGTAATGA
AGCAGCCGTATGGCCGCGAGCAGAAGCTCTACCTCA
MXO02962.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:06:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7872-PA | 1002 | CG7872-RA | 1..778 | 9..786 | 3890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7872-RA | 1653 | CG7872-RA | 230..1007 | 9..786 | 3890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15578434..15579211 | 9..786 | 3890 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:21:31 has no hits.
MXO02962.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:06:41 Download gff for
MXO02962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7872-PA | 1..777 | 9..785 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:20:01 Download gff for
MXO02962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7872-RA | 230..1006 | 9..785 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:08:51 Download gff for
MXO02962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7872-RA | 230..1006 | 9..785 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:51 Download gff for
MXO02962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15578434..15579210 | 9..785 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:20:01 Download gff for
MXO02962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15472467..15473243 | 9..785 | 100 | | Plus |
