MXO02965.5prime Sequence
792 bp (790 high quality bases) assembled on 2007-05-15
> MXO02965.5prime
CAGTCGACATGCAGCGAGTCCAGGCCGACCAAAAGCCAGCCAGAATGCAC
CAGCATGCACATACGCATTCGCACGCGCACAGTTTGCAGCATGCGGAGGA
GAAGGAGCACAATAGCAATGAGATGACGACCAACTTGTCGTCGACTGGCC
GAATTGCGGCCAGTAGCAGTGCCACGCCCAGCGCAGCAGCGGGAGGCGGG
GCCAGCGGAGCACCCACTCCGCCCAAGAGTCTGGCGCTCAATCAGAACCA
TCACTATGCACCCGGTTCGGATACATCCGGGGAACAGGAGGAGGAGCTGC
TGGACTCGCGATACGAGTGCGCCATTTGCATCGATTGGCTAAATGAGCCG
GTGTTGACGTCGTGCGGCCATCGATTTTGTCGCAGCTGCCTCACCGCCTG
GATGCAAAAGAACAATCAATGCTGCCCCATGGACAACAAGCGTCTGTCCG
CCGAGCACGACATCTTTCCGGACAACTACACGCGCCGCGAGATCGAGCAA
CTCAAGCGAGATTGCCCCAACTCCTCGCTGGGCTGTTCGGTGGTTGCCTC
GCCCATCGAACTGCATCGCCATCTGCCCAGTTGTCCCTATCGGCGGCAGC
AGGAGCCGCAGGAGGAGAAGTGCCCGTTTGCCAAGATCAAGTGCGATTTT
GTGGGCCGACCAGAGACCAATCAGTTGGAGGAGCACCTCAAGGCCGACAT
GCCGCATCACATGCAGCTGATGCTGCAGGCATTCCAGCAGACAGCCATTG
CCACCTGGCAGCCACACAAGCCCAGCACAAGTGGCGCCGCCG
MXO02965.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10961-PA | 1428 | Traf2-RA | 1..784 | 9..792 | 3920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Traf6-RA | 2788 | CG10961-RA | 126..909 | 9..792 | 3920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8156478..8157261 | 792..9 | 3920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:57:12 has no hits.
MXO02965.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:43 Download gff for
MXO02965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10961-PA | 1..784 | 9..792 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:57 Download gff for
MXO02965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 118..909 | 1..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:02 Download gff for
MXO02965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 118..909 | 1..792 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:02 Download gff for
MXO02965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8156478..8157269 | 1..792 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:57 Download gff for
MXO02965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8050511..8051302 | 1..792 | 99 | | Minus |
