MXO02968.5prime Sequence
716 bp (638 high quality bases) assembled on 2007-05-15
> MXO02968.5prime
CAGTCGACATGTTTTTGCATAACACAAAGTTTTGCAGACTGGCAAGTGGT
CTGGCAGGAGGAGTGCGCAACCTGAGCGGCCAAAAACCGAAGACCGCGAT
CCTAATGCTGAACATGGGCGGTCCGACCCACACGGACCAGGTGCATGACT
ACCTCCTGCGTATTATGACCGACCGGGACATGATCCAGCTGCCGGTGCAG
AGCCGTCTTGGTCCGTGGATCGCCCAGCGCAGGACGCCCGAGGTACAGAA
GAAGTACAAGGAGATCGGCGGTGGTTCACCGATTCTTAAGTGGACCGAGC
TGCAGGGCCAGCTCATGTGCGAGCAGTTGGACAGAATCTCCCCGGAGACA
GCACCTCACAAGCACTACGTCGGTTTCCGCTACGTGAATCCCCTCACTGA
GAACACGCTGGCCGAGATCGAAAAGGACAAACCAGAGCGCGTTGTACTCT
TTTCACAATATCCACAGTACAGCTGCGCCACCTCCGGATCCAGCTTTAAC
TCCATATTTACTCATTATCGGAGCAATAATCTGCCCTCGGATATCAAATG
GAGCATTATCGACAGGTGGGGCACTCATCCACTTCTAATCAAAACGTTTG
CCCAGCGAATTCGCGACGAGCTGGCCAAATTTGTGGAAACGAAACGAAAT
GATGTGGTCATCCTCTTCACTGCCCACTCCCTTCCCTTAANGCTGTGACC
GGGGTGACGCGTATCC
MXO02968.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:06:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2098-PA | 1155 | ferrochelatase-RA | 1..678 | 9..686 | 3390 | 100 | Plus |
| CG2098-PC | 846 | ferrochelatase-RC | 1..678 | 9..686 | 3390 | 100 | Plus |
| CG2098-PB | 681 | ferrochelatase-RB | 45..204 | 527..686 | 800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| FeCH-RC | 1466 | CG2098-RC | 87..796 | 9..716 | 3489 | 99.6 | Plus |
| FeCH-RA | 1407 | CG2098-RA | 87..796 | 9..716 | 3489 | 99.6 | Plus |
| FeCH-RB | 1338 | CG2098-RB | 1..480 | 47..526 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31811740..31812119 | 425..46 | 1900 | 100 | Minus |
| 3R | 32079331 | 3R | 31811130..31811321 | 716..527 | 849 | 98.4 | Minus |
| 3R | 32079331 | 3R | 31811377..31811478 | 526..425 | 510 | 100 | Minus |
| 3R | 32079331 | 3R | 31812171..31812210 | 48..9 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:11 has no hits.
MXO02968.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:06:46 Download gff for
MXO02968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2098-PC | 1..710 | 9..716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:08 Download gff for
MXO02968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FeCH-RA | 80..796 | 2..716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:14 Download gff for
MXO02968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FeCH-RA | 80..796 | 2..716 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:14 Download gff for
MXO02968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31811130..31811321 | 527..716 | 98 | <- | Minus |
| 3R | 31811377..31811478 | 425..526 | 100 | <- | Minus |
| 3R | 31811741..31812119 | 46..424 | 100 | <- | Minus |
| 3R | 31812174..31812217 | 2..45 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:08 Download gff for
MXO02968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27636852..27637043 | 527..716 | 98 | <- | Minus |
| arm_3R | 27637099..27637200 | 425..526 | 100 | <- | Minus |
| arm_3R | 27637463..27637841 | 46..424 | 100 | <- | Minus |
| arm_3R | 27637896..27637939 | 2..45 | 91 | | Minus |
