MXO02970.5prime Sequence
816 bp (751 high quality bases) assembled on 2007-05-15
> MXO02970.5prime
CAGTCGACATGACCCAACAGAGGCCAGCTTTCGACTCCAATGCGATGACG
CTGACGCGTTTCGTGCTGCAGGAGCAGCGAAAGTTCAAGAGCGCCACTGG
CGATCTCTCCCAGCTGCTCAACTCCATCCAGACCGCCATCAAGGCTACAT
CATCCGCGGTGCGGAAGGCAGGTATCGCCAAGCTCCATGGATTCGCTGGC
GACGTGAATGTCCAAGGCGAGGAGGTCAAGAAACTGGACGTGCTCTCCAA
CGAGCTGTTCATCAACATGCTGAAGTCATCCTATACCACATGTCTAATGG
TTTCCGAGGAGAACGAGAATGTGATCGAGGTGGAAGTGGAGAAACAGGGC
AAATACATCGTGTGCTTCGATCCCTTGGATGGATCCTCCAACATAGACTG
CCTGGTGTCGATCGGTTCAATCTTCGCCATTTACCGCAAGAAAAGCGATG
GTCCGCCCACAGTGGAGGATGCACTGCAGCCCGGAAATCAGCTGGTGGCC
GCCGGCTACGCGCTATACGGTTCGGCCACAGCAATTGTCCTGGGTCTGGG
TTCGGGAGTGAATGGCTTCACTTATGACCCGGCCATCGGAGAGTTCGTGC
TGACCGATCCCAACATGCGGGTGCCGGAGAAGGGAAAGATATACTCTATC
AACGAGGGATATGCAGCGGATTGGGAGGATGGTGTCTTCAACTACATTGC
GGCCAAGAAGGATCCCGCCAAGGGAAAGCCCTATGGAGCGCGGTACGTGG
GTTCCATGGTCGCGGATGTGCATCGCACCATTAAATACGGCGGCATCTTT
ATCTATCCGGCAACAA
MXO02970.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31692-PA | 1005 | fbp-RA | 1..808 | 9..816 | 4040 | 100 | Plus |
| CG31692-PB | 1032 | fbp-RB | 28..835 | 9..816 | 4040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbp-RE | 1202 | CG31692-RE | 145..952 | 9..816 | 4040 | 100 | Plus |
| fbp-RA | 1130 | CG31692-RA | 73..880 | 9..816 | 4040 | 100 | Plus |
| fbp-RD | 1185 | CG31692-RD | 140..935 | 21..816 | 3980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19761837..19762308 | 816..345 | 2360 | 100 | Minus |
| 2L | 23513712 | 2L | 19762487..19762826 | 348..9 | 1700 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:57:03 has no hits.
MXO02970.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:38 Download gff for
MXO02970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31692-PB | 28..833 | 9..814 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:52 Download gff for
MXO02970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbp-RA | 73..878 | 9..814 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:58 Download gff for
MXO02970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbp-RA | 73..878 | 9..814 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:58 Download gff for
MXO02970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19761839..19762305 | 348..814 | 100 | <- | Minus |
| 2L | 19762488..19762833 | 1..347 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:52 Download gff for
MXO02970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19761839..19762305 | 348..814 | 100 | <- | Minus |
| arm_2L | 19762488..19762833 | 1..347 | 98 | | Minus |
