MXO02971.5prime Sequence
486 bp (486 high quality bases) assembled on 2007-05-15
> MXO02971.5prime
CAGTCGACATGTCCCTGGTGCGAAACTCCTCCCGGTTGCTGCGATCGCAG
CTGAAGCGCGTACAAAGTGTCCCGGTGGCATTGTATCATGAAAATGTCGT
TGAGCACTACGAAAACCCGCGCAACGTGGGATCTTTGGACAAGAAGGATG
TCACTGTGGGCACCGGCTTGGTCGGAGCACCAGCCTGCGGCGATGTGATG
AAACTGCAGATCAAGGTGGACGAGAACGGCAAGATAGTGGACGCCAAGTT
CAAGACCTTCGGCTGTGGATCGGCCATTGCCAGCAGCTCCCTGGCCACCG
AGTGGGTGAAGGGCAAGTCCATCGACGAGGCCGGAAAGCTGAAGAATACG
GACATCGCCAAGGAGCTGCGTCTGCCGCCCGTCAAGCTGCATTGCTCCAT
GCTGGCCGAGGATGCCATCAAGGCGGCCCTGGCTGACTACAAGGTCAAGC
AGCAGAAGAAGGTGGCCAACGCAAGCTTTCTAGACC
MXO02971.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9836-PA | 465 | CG9836-RA | 1..462 | 9..470 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9836-RA | 955 | CG9836-RA | 107..568 | 9..470 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8823427..8823801 | 470..96 | 1875 | 100 | Minus |
3R | 32079331 | 3R | 8823983..8824071 | 97..9 | 445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:09:38 has no hits.
MXO02971.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:47 Download gff for
MXO02971.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9836-PA | 1..465 | 9..473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:25 Download gff for
MXO02971.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9836-RA | 107..568 | 9..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:55 Download gff for
MXO02971.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9836-RA | 107..568 | 9..470 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:55 Download gff for
MXO02971.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8823427..8823801 | 96..470 | 100 | <- | Minus |
3R | 8823985..8824071 | 9..95 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:25 Download gff for
MXO02971.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4649149..4649523 | 96..470 | 100 | <- | Minus |
arm_3R | 4649707..4649793 | 9..95 | 100 | | Minus |