MXO02972.5prime Sequence
901 bp (809 high quality bases) assembled on 2007-05-15
> MXO02972.5prime
CAGTCGACATGATCAACACAGGAAAACTAGCCGGACGGACCCTGTTCATC
ACGGGAGCCTCTCGAGGAATTGGCAAGGAGATTGCTCTAAAGGCGGCCCG
CGATGGAGCCAACATTGTGGTGGCGGCCAAGACGGCGGAACCGCATCCCA
AGCTGCCGGGCACCATCTACTCGGCTGCGGAGGAGATCGAGAAGGCCGGC
GGAAAGGCCTATCCCTGCGTTGTGGATGTGCGGGATGAGCAACAGGTGCG
CAGCGCCGTTGAGGCCGCGGTGGCCAAGTTCGGTGGCATCGACATTGTGA
TCAATAACGCCAGCGCCATCTCGCTGACCAATACCCCGGATACGGACATG
AAGCGCTACGACCTGATGCACAACATCAATACTCGAGGCACCTTTCTGGT
GTCCAAGGTGTGCCTGCCGTACCTGAAGAAGAGCAACCACGCCCACATTC
TCAACATCTCGCCGCCGCTGAGCATGAAGCCCAAGTGGTTTGGCCCGCAT
GTGGCCTACACCATGGCCAAGTACGGTATGTCCATGTGTGTGCTCGGCAT
GGCCGCGGAGTTCAAGGACGAGGGAATCTCCGTCAACGCTCTGTGGCCGC
GCACTGCCATTCACACGGCGGCCATCGAGATGCTGACGGGTCCAGATTCC
GCCAAGTGGTCACGCAAGCCGGAGATCATGGCCGATGCCGCCTACGCAAT
CCTGACCCGTGAGCCCAGGCAGTCTACTGGTCAGTTCTTTGTGGACGACG
AGGTGCTGGAATCGGCGGGCATCACTGATCTCACCGAATACGCCTGCTTC
CGCGAGAACGCCGACAAGCTGATGGTGGACTTCTTCGTGGAGGAGAAGGG
AGCTCCGGTAGAGAATGAACCTGCGGCAGAAAATGCTGCTGCTCCCGCAA
G
MXO02972.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5590-PA | 1239 | CG5590-RA | 1..893 | 9..901 | 4415 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5590-RA | 1492 | CG5590-RA | 163..1055 | 9..901 | 4435 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27677684..27678576 | 9..901 | 4435 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:09:19 has no hits.
MXO02972.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:09:57 Download gff for
MXO02972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5590-PA | 1..893 | 9..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:04 Download gff for
MXO02972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5590-RA | 159..1055 | 1..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:21 Download gff for
MXO02972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5590-RA | 159..1055 | 1..901 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:21 Download gff for
MXO02972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27677680..27678576 | 1..901 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:04 Download gff for
MXO02972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23503402..23504298 | 1..901 | 99 | | Plus |
