MXO02979.5prime Sequence
774 bp (731 high quality bases) assembled on 2007-05-15
> MXO02979.5prime
CAGTCGACATGCCGAAAAACGGAGGTGCTGGTCACAGGAACACTGCTCCC
AGGAAGCGCCAAATACCGGCTGCCCAGCTGGATGAAGACAGTCCCATTGT
CCAACAATTTCGAATTTATTCTAATGAATTGATCATGAAACACGATCGCC
ACGAGCGAATTGTCAAGCTGAGCCGTGACATTACCATCGAGTCCAAGCGT
ATCATCTTCCTGCTGCACTCCATTGACTCGCGTAAGCAGAATAAGGAGAA
GGTCCTGGAGGAGGCACGTCAGCGACTGAACAAGCTGATCGCGGTTAACT
TTAGGGCTGTGGCCCTGGAACTGCGCGACCAGGATGTCTACCAGTTCCGC
AGCTCCTACTCTCCAGGATTGCAGGAGTTTATCGAGGCCTACACCTACAT
GGAGTACCTGTGCCACGAGGATGCTGAGGGCGAGAACGAAACCAAGAGCG
TTTCAGATTGGCAGGCCATTCAGGCGGTGATGCAGTACGTCGAGGAGAGC
AGCCAGCCAAAGGAAGAACCAACTGAAGGCGAAGATGTTCAGGCTATAGC
TCAGGTTGAGAGCCCAAAGAAGTTCCAGTTTTTCGTAGACCCCACGGAAT
ATATACTTGGACTTTCGGATCTTACTGGTGAACTGATGCGCCGCTGCATA
AATTCGCTAGGCAGTGGAGATACAGACACCTGTTTGGACACCTGCAAGGC
CCTGCAGCATTTCTACAGCGGGTTGGTTAGTTCTCCCTTAAGAAACTCAA
TTAACTTCCTATTGTTTTCAGTTA
MXO02979.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:06:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5063-PA | 777 | Trax-RA | 1..766 | 9..774 | 3830 | 100 | Plus |
| CG5063-PB | 879 | Trax-RB | 1..717 | 9..725 | 3585 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trax-RA | 1127 | CG5063-RA | 134..899 | 9..774 | 3830 | 100 | Plus |
| Trax-RB | 1077 | CG5063-RB | 134..846 | 9..721 | 3565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15361825..15362590 | 9..774 | 3830 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:26:02 has no hits.
MXO02979.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:07:00 Download gff for
MXO02979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5063-PA | 1..765 | 9..773 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:24 Download gff for
MXO02979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trax-RA | 129..898 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:58 Download gff for
MXO02979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trax-RA | 129..898 | 1..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:58 Download gff for
MXO02979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15361820..15362589 | 1..773 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:24 Download gff for
MXO02979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11187542..11188311 | 1..773 | 99 | | Plus |
