MXO02982.5prime Sequence
818 bp (755 high quality bases) assembled on 2007-05-15
> MXO02982.5prime
CAGTCGACATGTTCGCCAAGCTATCAGCCCGCGGGATCGCCACCCGCATG
AGCTTCTTGGCACAGAAGACAGCTTCCCAGGAGACGACGGCCGCCGCCGG
ATCCCGTTCCGAACTCGTCTATGCCAGGGAGAACAAGTACGGCGCCCACA
ACTACCACCCACTGCCCGTGGCCCTGACCAAGGGCGAGGGCGTGTTTGTC
TGGGATGTGGAGGGCAAGCGCTACTTCGACTATCTGAGCGCCTACTCGGC
GGTCAACCAGGGTCACTGCCATCCCAAGATCGTAGCGGCACTCACAGCAC
AGGCCTCCAAGTTGGCCTTGACATCGCGTGCCTTCTATTCGGATGTCCTT
GGAGAGTACGAGGAGTACGTGACCAAGCTCTTTGGCTTCGACAAGGTGCT
GCCCATGAACACGGGCGTTGAGGGCGGAGAAACCGCCTGCAAGTTGGCCC
GCAAGTGGGGCTACCTGGAGAAGAAGATACCTGCCAACCAGGCAAAGATC
ATCTTCGCGCGCAACAACTTCTGGGGACGCACCCTGTCGGCGGTGTCCGC
CTCCAATGATCCCAGTAGCTACGAGGGATTCGGACCCTTCATGCCCGGAT
TCGAGCTGATCGAGTACGACAATGTGTCAGCGCTGGAGGAGTCCCTCAAG
GATCCGAATGTGTGCGCCTTCATGGTGGAGCCCATTCAGGGAGAGGCTGG
CGTGGTGGTGCCCAGTGATGGCTATCTGAAGAAGGTGCGAGAGCTCTGCA
CCAAGTACAATGTGCTCTGGATTGCCGACGAGGTGCAGACAGGATTGGCC
AGAACTGGAAAGCTGCTG
MXO02982.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:10:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8782-PA | 1296 | Oat-RA | 1..810 | 9..818 | 4050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oat-RA | 1501 | CG8782-RA | 90..901 | 7..818 | 4060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19647936..19648426 | 818..328 | 2455 | 100 | Minus |
| 3L | 28110227 | 3L | 19649441..19649762 | 328..7 | 1610 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:32:17 has no hits.
MXO02982.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:10:05 Download gff for
MXO02982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8782-PA | 1..810 | 9..818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:58 Download gff for
MXO02982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oat-RA | 85..901 | 1..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:58 Download gff for
MXO02982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oat-RA | 85..901 | 1..818 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:58 Download gff for
MXO02982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19649441..19649767 | 1..328 | 99 | | Minus |
| 3L | 19647936..19648425 | 329..818 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:58 Download gff for
MXO02982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19641036..19641525 | 329..818 | 100 | <- | Minus |
| arm_3L | 19642541..19642867 | 1..328 | 99 | | Minus |
