MXO02987.5prime Sequence
809 bp (734 high quality bases) assembled on 2007-05-15
> MXO02987.5prime
CAGTCGACATGCTCAAGTTCCAGGCCCATTCTCCGGGCAAGGTCATACTC
CATGGCGAACACGCCGTGGTCTATCATCGTCCCGCCCTCGCCGCCGTAGT
GGGTTTGGGCACTACTCTGAGATTTCGGCAGCTGGAGGACAGCCAGGTGG
CAAGTTTTCAACTGGAGGCCCTTAACTGCACACTGGAGATCCAGTTGCCG
GAGTTCAATGGATTTTTGGCTGAATTTAGGAGTAAATACCCATCAGATAG
CACGGCCAATCTGTTGGAAGCCGTCCGCGCAGAGGTGTCCAAACAACTTG
AACGATCCGGAGGCAATGCACCGAAGCAGCACACCCAGCGGGCATTCATC
TCCATATACTATTTGCTGGCCGGCGCTGTACTCTCCGCACCCGGCGACAA
GAAACTGACGCTGCAAACCGGTTTCCAGGTGCAGGTAGACAGCCAGCTAA
CCGTGGGTGCGGGTTTGGGCAGTTCCGCCTCTTTCGGAGCAGCTTTGGCC
ACGACATTTCTCATTTTGGCCGGACACTTTGATAGAGACAGCTACTTGTC
GGAGGCAAACCAGGCGTTGATCTCGTCCTGGGCTTATGAATCGGAGCGTG
TTAATCATGGCACGCCCTCGGGTCTGGACAACACTGTATGCACCTACGGC
GGAATGTTGCGGTATGTCAAGGGCCAGGGCTTCCAGTCGCTGAAGATCCA
GAAACCACTAAACATCCTGCTGGTGGACAGTCGTGTGAGTCGCAACACCG
CCGACATTGTGGCCAAGGTTCGTCATCTGGGAGATGCCTTTCCGCAGCTC
ATCGAGGCC
MXO02987.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:07:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33671-PA | 1173 | CG33671-RA | 1..801 | 9..809 | 3955 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33672-RA | 1976 | CG33672-RA | 716..1516 | 9..809 | 3975 | 99.8 | Plus |
| CG33671-RB | 1517 | CG33671-RB | 257..1057 | 9..809 | 3975 | 99.8 | Plus |
| CG33671-RA | 1976 | CG33671-RA | 716..1516 | 9..809 | 3975 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12634626..12635426 | 809..9 | 3975 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:10:03 has no hits.
MXO02987.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:07:33 Download gff for
MXO02987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33671-PA | 1..801 | 9..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:27 Download gff for
MXO02987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33672-RA | 716..1516 | 9..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:54 Download gff for
MXO02987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33671-RA | 716..1516 | 9..809 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:54 Download gff for
MXO02987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12634626..12635426 | 9..809 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:27 Download gff for
MXO02987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8522131..8522931 | 9..809 | 99 | | Minus |
