MXO02988.5prime Sequence
528 bp (528 high quality bases) assembled on 2007-05-15
> MXO02988.5prime
CAGTCGACATGGGGCTTCCTCCATCCTTTGTCAGCGGCAGCCCGTTCAAT
GTGGTTCCCATTCACAACTACCCGGAGCTTGTGAAAGACACTTGCGCCCT
AATCAACGCAGAGTGGCCACGATCGGAAACGGCGCGCATGCGCTCCCTGG
AGGCCTCCTGTGACAGCCTACCCTGCAGCCTGGTGCTGACCACCGAGGGA
ATGTGCCGCGTGATCGCTCACCTCAAGCTCAGCCCGATCAATTCCAAGAA
GAAGGCCTGCTTCGTCGAGTCCGTGGTGGTGGACAAGCGGCACCGTGGCC
AGGGATTCGGCAAGCTGATCATGAAGTTCGCCGAGGACTATTGCCGCGTC
GTGCTGGACCTCAAGACCATATATCTGTCCACCATCGACCAGGATGGATT
CTACGAACGCATTGGCTACGAGTACTGCGCTCCCATTACAATGTATGGGC
CGCGCCACTGTGAGCTGCCCAGCTTGCAAAATGCCAAAAAGAAATACATG
AAGAAGGTCTTAGCAAGCTTTCTAGACC
MXO02988.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:10:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-PA | 507 | CG8481-RA | 21..504 | 29..512 | 2395 | 99.7 | Plus |
| CG8481-PB | 537 | CG8481-RB | 51..534 | 29..512 | 2395 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-RA | 1412 | CG8481-RA | 305..808 | 9..512 | 2460 | 99.2 | Plus |
| CG8481-RB | 1506 | CG8481-RB | 402..902 | 12..512 | 2445 | 99.2 | Plus |
| MED6-RB | 1758 | CG9473-RB | 1..63 | 73..11 | 270 | 95.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9768922..9769423 | 11..512 | 2450 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:10:35 has no hits.
MXO02988.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:10:27 Download gff for
MXO02988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-PB | 31..537 | 6..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:52 Download gff for
MXO02988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 297..808 | 1..512 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:15 Download gff for
MXO02988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RA | 297..808 | 1..512 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:15 Download gff for
MXO02988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9768913..9769423 | 1..512 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:52 Download gff for
MXO02988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5594635..5595145 | 1..512 | 98 | | Plus |
