MXO02990.5prime Sequence
718 bp (696 high quality bases) assembled on 2007-05-15
> MXO02990.5prime
CAGTCGACATGTTGGCACAATTGAGAAATATTTCGAAGCTGGCGCTGCCG
CGCCGCCTCGTTACCCAAACCGCCAGCTACTCATCGTCCTCGTCATATCT
CATTGACCAGCCGGAGTACAGTTTCCTGAAAGAATTGGGACTGGAGCGCG
ACAATCCAGGTGTTTATTCGGGTCAGTGGCAGGGTCGTGGGCCATCCGTT
ACCAGCTACGATCCCGGAACTGGTCAACCGATTGCCAAAGTGCGTCAGGG
AAATGTCCAGGAGCTCGAGCATACCATCGGGCTGGCGGTGGAAGCCTACA
AGCAGTGGCGACAGGTTCCAGCTCCCGTTCGCGGCGAAATAGTGCGCCAA
ATCGGCGATGAGCTGAGAAAGTACAAGGAACCACTGGGAAAGCTCGTCTC
CCTGGAGGTGGGCAAAATCTACAGCGAGGGACAGGGCGAGGTTCAGGAGT
TCATAGATATCTGCGACTATGCGGTTGGCCTCTCAAGGATTTACTCCGGC
CAGCTGATCAACTCGGAGCGTGCGGATCATTCGATTCTGGAGGCCTGGCG
TCCGCTGGGAGTGGTGGGCGTTATTTCGGCCTACAATTTTCCCAATGCTG
TGTTCGGCTGGAATGCTGCCATCGCCCTAACCACCGGCAACAGTGTGCTG
TGGAAAGGAGCTCCCAGCACTCCCTTGGTCTCGGTGGCGACCACAAAAAT
TGTGGCTGAAGTGCTGCG
MXO02990.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:10:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9629-PA | 1623 | CG9629-RA | 1..710 | 9..718 | 3550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9629-RA | 2053 | CG9629-RA | 65..776 | 7..718 | 3560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19267750..19268460 | 718..8 | 3555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:09:44 has no hits.
MXO02990.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:10:46 Download gff for
MXO02990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9629-PA | 1..710 | 9..718 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:30 Download gff for
MXO02990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9629-RA | 59..776 | 1..718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:00 Download gff for
MXO02990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9629-RA | 59..776 | 1..718 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:00 Download gff for
MXO02990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19267750..19268463 | 1..718 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:30 Download gff for
MXO02990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19260850..19261563 | 1..718 | 99 | | Minus |
