MXO02996.5prime Sequence
875 bp (805 high quality bases) assembled on 2007-05-15
> MXO02996.5prime
CAGTCGACATGTACAGGTCTCTGCTGCACAACGTTTCACTCAAGGCGACA
TCAAGGATTATCAGGCGCAGCGTGAGCAGCCAGGCAAAAGGAGCCAGCGG
AAAGCGCAAACAAAAAGCGAAGGAGATGGAGTCGAGCCACGATCGGAATA
GACGCTGGACGTCATTGGGGAATCAGGCTGAGGGTCGAGACCCGCACAAG
TGCTCCTCCTTCAAGGTTGTCTCATATAACATCCTGGCCCAGGATCTGCT
TCTGGAGCACCTCTTCCTGTACGTGGGAATCCCGCATGAGTTCCTCAGCT
GGCAACGCCGCCAGCAGAACCTTCTCAGGGAACTGCTCAAACTGGATCCG
GACATACTGTGCCTGCAGGAGATGCAGTTCGACCACCTTCCAGTGCTCGT
CCAACGACTGCGTATGGGCAACGGCAAGAAGTTGGCTTATGTGTACAAAA
AGAAGACCGGCTGTCGAACGGACGGATGCGCTATTGTCTACGACTCCTCA
AAGTTTGAGTTGCTAGACCACCAAGCAGTGGAGCTGTACGACCAGGCGGT
GGCTCTACTCAATCGCGACAATGTGGCCTTGTTTGCCAGGTTCCGATTCA
AAAAGCAGCAGGAGCAGCAGAAGGAATTCGTGGTCGCCACCACGCACTTG
CTGTTCAACACGAAACGGAGCGATGTCCGTTGCGCCCAGGTGGAAAGAAT
TTTGGAGGAGCTGCAGTCGTTCTCCACCGACACACCTATCGTCCTGACTG
GTGACTTTAACAGTCTGCCCGACTCCTCGCCTATTGAATTCCTCGTTGGC
AAGAATGTGGATGTGGATTCCACAGCTTGCCCAGAACCCCTGCATTTCGA
GATCATCGATTCGGGCGAAGGTACT
MXO02996.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:10:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12273-PA | 1065 | angel-RA | 1..867 | 9..875 | 4310 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| angel-RA | 1230 | CG12273-RA | 116..982 | 9..875 | 4320 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23694118..23694984 | 9..875 | 4320 | 99.9 | Plus |
Blast to na_te.dros performed 2014-11-28 21:10:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aurora-element | 4263 | aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). | 3273..3422 | 372..532 | 120 | 58.4 | Plus |
| Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 5557..5620 | 372..435 | 113 | 64.1 | Plus |
MXO02996.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:10:51 Download gff for
MXO02996.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12273-PA | 1..867 | 9..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:58:06 Download gff for
MXO02996.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| angel-RA | 108..982 | 1..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:24 Download gff for
MXO02996.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| angel-RA | 108..982 | 1..875 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:24 Download gff for
MXO02996.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23694110..23694984 | 1..875 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:58:06 Download gff for
MXO02996.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19581633..19582507 | 1..875 | 99 | | Plus |
