MXO03001.5prime Sequence
832 bp (671 high quality bases) assembled on 2007-05-24
> MXO03001.5prime
CAGTCGACATGACGCGCGATGAGAAACTGCCACTTAAACAGGCGGAGGTC
TCCATCCAAAGGTTTCAGGATGTGGCGGTGCCCCACCATCTGAGCCTACT
GAAAAACCATCGCAGCAATATAGAAAAAAGCCTGGCGCTCGGCGACTGGC
AAAAAATCAAAAAGGAGGAACTCAATGCTATGAGGGTCATTAAGCAGATC
AAGAATCTACTTCTGGAAATGGATGCACTGCGAGAAAAAGTACGGGAGGA
GGATCTGGAACGTTTCGACGACCTAATGAAACCTGGCAGGGATACTGCCT
TCGCTGGCATGAAGGAATTTGCGGAGCTCCAACTCAAATCACCCACCTCC
ACTTTGAGTTCTCAGTACGACGACGATCTGGACAATCAGCCACAGGAGGT
GGATATGAACAGTCTACCCGCACACCGCCACATGCCCCAGCTGCAACTCA
ATTTCCAGCTGGAGGAACACCAATTGGCGCAGAGGCAAGCCTGCCTGGAT
CAGATGGAGAACCTGCAACAGGAGATCTACGATCTGCACGGGATGTTCCA
GGGAATGCGTCAACTGACTGCAGAGCAATCAGTGGCGGTGGAAAAGATAG
CAGACAATGCGGAGGAAGCTCTGGAGAATGTCCAGCAGGGCGAATTGAAT
CTGCGCCGGGCGCTCACCTACAAGAAGGCCATGTACCCCGTAGTCGGAGC
TCTTCTGGGCACCTGTGTGGGAGGACCCATTGGTCTGGGGGCGGGCATGA
AAGCTGGAGGATTGGCGGCAGTAGGATGTGGCATCCTCCGCTTCACCGGT
GGCTCTGTGCTAAAGGCCAATCCCAAGGTAAT
MXO03001.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:21:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7452-PA | 906 | Syx17-RA | 1..824 | 9..832 | 4045 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Syx17-RB | 1566 | CG7452-RB | 341..1164 | 9..832 | 4075 | 99.6 | Plus |
Syx17-RA | 1566 | CG7452-RA | 341..1164 | 9..832 | 4075 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4404258..4404766 | 324..832 | 2500 | 99.4 | Plus |
3L | 28110227 | 3L | 4403950..4404197 | 77..324 | 1240 | 100 | Plus |
3L | 28110227 | 3L | 4403827..4403897 | 9..79 | 355 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:59:09 has no hits.
MXO03001.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:22:01 Download gff for
MXO03001.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7452-PA | 1..824 | 9..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:02 Download gff for
MXO03001.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Syx17-RA | 332..1164 | 1..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:01 Download gff for
MXO03001.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Syx17-RA | 332..1164 | 1..832 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:01 Download gff for
MXO03001.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4403818..4403895 | 1..77 | 96 | -> | Plus |
3L | 4403951..4404197 | 78..324 | 100 | -> | Plus |
3L | 4404259..4404766 | 325..832 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:02 Download gff for
MXO03001.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4403818..4403895 | 1..77 | 96 | -> | Plus |
arm_3L | 4403951..4404197 | 78..324 | 100 | -> | Plus |
arm_3L | 4404259..4404766 | 325..832 | 99 | | Plus |