MXO03013.5prime Sequence
746 bp (745 high quality bases) assembled on 2007-05-24
> MXO03013.5prime
CAGTCGACATGGATCCCGAGTTCGTGAACAAATACAATCAGGTCCTTAGC
CGTCTGAAGCTAGTGGAGAACTTCGATGGCAGTGATCCTGGCAAGCTGCC
GCAGTTCCTGCACAAAATCGAGGCCCTTATGCCGGCCATAAATAGTTTCG
ACGACTACTACAAGTTTCAATTGATAGGACATATCAAAAATAAGTGCACA
GATCGCGCCAGGGAGGCGGTCTTCACGCGACAAATGAGCGCTCCCGTGGG
CAATGGCAATGGCAATGGCGGCGGGAATGGTCATCTCCTGAAGGCCGAGT
CCTGGCTAAAACTCAAGGATCAACTGCTGTACAACTATGCGGAGCGGGAG
TCTAGCTACTCGCTGATACACAAGATACGCAGCGCTGTCTTGGACTCGAA
CATAGAGTTGTACTACCAGAAGATGGCCAAACTCAAGCACAGACTGATCA
ATAGAAAGCTCACGCACAATGACACCCTGTACAGTCTCGAGGACATAGAG
CGCATCACGCTGCAGGTGTTCCGAGATCATCTGCCCGAGCCGACGCACTC
GATGATCCTGCGCCGGAATCCCAAGAGCATGGAGGAGGCCTATCGCTACA
TAGTGGAGGTGCAGCAGCAGTTCTACACACAGAGCGGATCTCTGGCCAGT
GACCATCAGGCGGCCACCTTCAGCACCAGCCACAAGCAGCAGTCCTACGG
CGTGGGAATGGGCGGAGTGGGCGTGAGCACCGTTGGCGTGGGCGTC
MXO03013.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:22:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4680-PA | 1059 | CG4680-RA | 1..738 | 9..746 | 3690 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Grp-RB | 2295 | CG4680-RB | 365..1102 | 9..746 | 3690 | 100 | Plus |
| Grp-RA | 1505 | CG4680-RA | 113..850 | 9..746 | 3690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16394950..16395687 | 9..746 | 3690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:48:21 has no hits.
MXO03013.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:22:59 Download gff for
MXO03013.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4680-PA | 1..738 | 9..746 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:50 Download gff for
MXO03013.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Grp-RA | 313..1059 | 1..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:28 Download gff for
MXO03013.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Grp-RA | 104..850 | 1..746 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:28 Download gff for
MXO03013.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16394941..16395687 | 1..746 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:50 Download gff for
MXO03013.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16388041..16388787 | 1..746 | 99 | | Plus |
