MXO03015.5prime Sequence
731 bp (565 high quality bases) assembled on 2007-05-24
> MXO03015.5prime
CAGTCGACATGGACAACAGCGCGTTGATGCCACAGGCGAGCGGACGTCAT
ATGCCGCCCGAGGAACTGGCCATGCAAGCACTAACCAAGCAGCTTTACAA
GTCTCGTCTCTTCCGCGGTTATTATATGGAACGCTGCTTGGTGGAGCAGG
TGTCCGGCTACCGGGACGTGGTGGTGCTTCAACGCAGTGAGCGAGAGTTG
GAGAAGCTGCTGCACTCGAGTGCCGGCCAATTACAAAAGTTTTATCAACG
CTTCGTGCCCAATATGTGGGTGGGCATCACCTATGGGAGTTACGGAAGTT
ACCAGCACAAAGCAGATCCTGGTCAACTGGAAACCTGCATCTGGACAGAG
ATGAATGATCTGGCTTTTGGAGAGTATTGGTTTAGCATCAAGACCCTTCG
CTTCCGGGACCATGAAGTCCAGTTCAAACTGAAGATGATAAGGCCCGTGG
AGCCAGAGCTGATGGCGACGCCGAGGAGATCACTGATTCTTAATAGAAGT
AGCCCTGTTAAGGCGATCACAGCGGGTGGGGAAAACTCCTCCTCCAAGCC
GGATGAAGTGGCGGAGCAAATTCAGCTGGGCCTTAATGATTTTTTGGCTG
TGCTGCAACAGTGGGGTGATGGAGTCAAACAAACCGTGTACGACTTCATG
ACCAACGATGTCAACAAGAGGAACATTTTGGGCACCATTCGGTTTCTGGG
TCTACTAATTTTCTCTGCCTTGCGTGGAGCC
MXO03015.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4287-PA | 1002 | CG4287-RA | 1..723 | 9..731 | 3590 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4287-RB | 1644 | CG4287-RB | 267..994 | 4..731 | 3610 | 99.7 | Plus |
| CG4287-RA | 1648 | CG4287-RA | 275..998 | 8..731 | 3605 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15962817..15963540 | 731..8 | 3605 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:41:28 has no hits.
MXO03015.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:23:10 Download gff for
MXO03015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4287-PA | 1..723 | 9..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:40 Download gff for
MXO03015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4287-RB | 246..976 | 1..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:50 Download gff for
MXO03015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4287-RB | 264..994 | 1..731 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:50 Download gff for
MXO03015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15962817..15963548 | 1..731 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:40 Download gff for
MXO03015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11788539..11789270 | 1..731 | 99 | | Minus |
