MXO03019.5prime Sequence
893 bp (849 high quality bases) assembled on 2007-05-24
> MXO03019.5prime
CAGTCGACATGGCCACGGAGGAGCACCAGCGCCTGGCCAGCATCGTGAAG
AGCTGCCACGAAAGCCTGCGCCAGTTGACTAAGGAGTATGGCGCCACAGC
GGCCTGGCAGGAGCACACGAGTCCCAGGAACGCCAAGCAACTGGCGGAGT
ACGCCAAGGCGATGAAGCAACTGGCGGCCATATGGGAGACCAACGATGGG
AAGGTGGAGCTGCAGGCACGCAGCCGCATCAAGTGGGCCATCGACTACAT
CACCAAGTACTTCTTTACCGAGGGCATATATTTGCAGAAGCGCCAGCGGG
AGCAGCGACTCCTGGAATCCTACAGAGCCGAGGGAAAACTGGGCGAGGTG
CAGTGCAGGCTGATGGAGGAGCCGCCGGACAGGCTGCACGTCCTGGATGT
GGGCAGCTGCTTCAATCCCTTTTCCAGTGCTCCGCACTTGGAGGTAACCG
CCCTGGACTTGTGTCCCGCCACCGAAGATGTGCTGCAGGCGGATTTCCTC
AAAGTGGAGGTGGTACCCGGAATACGAGAACCTGAGCTGGAGGAGGGCAG
CGTAAGAAGGCTACCAGCAAGCCACTACGAGTGCGTCATTTTCAGTTTGC
TACTGGAATACATGCCCAGCGCCGAGCAGAGACTACAGTGCTGCCTTCAG
GCCTACGACCTGCTGCTGCCCGAGGGCATCCTTGTGCTCATCACACCGGA
CTCCCAACATGTTGGCAAAAACGCCCACCTCATGAAAAACTGGCGCTACT
CCCTGGCCAGGATTGGACTGCTACGGGTACGCTTCGAGAAGTTGCCGCAC
ATATCGTGCATGGTGTTCCGCAAGGCCATCAGCCGGGAGCTCTCACAGCA
CTGGGCGAGCATTCACCGGGAGGAGGGGATGTGCGAGGAAATT
MXO03019.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:23:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-PA | 909 | CG3570-RA | 1..885 | 9..893 | 4425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3570-RA | 1099 | CG3570-RA | 75..963 | 5..893 | 4430 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24603646..24604534 | 5..893 | 4430 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:18:02 has no hits.
MXO03019.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:23:30 Download gff for
MXO03019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-PA | 1..885 | 9..893 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:53 Download gff for
MXO03019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 72..963 | 1..893 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:07 Download gff for
MXO03019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3570-RA | 72..963 | 1..893 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:07 Download gff for
MXO03019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24603643..24604534 | 1..893 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:53 Download gff for
MXO03019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20491166..20492057 | 1..893 | 99 | | Plus |
