MXO03023.5prime Sequence
231 bp (229 high quality bases) assembled on 2007-05-24
> MXO03023.5prime
CAATCGACATGAGCCACCACTGGGGATACACCGAATAGAACGGACCTGCC
CACTGGGCCAAGGAGTACCCACAGGCGTCGGGACATCGTCAGTCGCCCGT
GGATATCACACCCTCCAGCGCCAAGAAGGGCAGCGAACTGAATGTAGCTC
CGCTCAAGTGGAAGTATGTGCCGGAACACACCAAAGGCCTGGTCAATCCT
GGCTATTGCTGGCGCGTGGATGTGAACGGCG
MXO03023.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:23:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7820-PA | 813 | CAH1-RA | 1..223 | 9..231 | 1040 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CAH1-RA | 1456 | CG7820-RA | 304..526 | 9..231 | 1070 | 98.7 | Plus |
adat-RA | 3003 | CG16889-RA | 2354..2555 | 231..42 | 780 | 93.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13808808..13808968 | 42..202 | 775 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:48:23 has no hits.
MXO03023.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:23:45 Download gff for
MXO03023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7820-PA | 1..223 | 9..231 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:51 Download gff for
MXO03023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CAH1-RA | 300..526 | 1..231 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:29 Download gff for
MXO03023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CAH1-RA | 300..526 | 1..231 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:29 Download gff for
MXO03023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13808809..13808967 | 43..201 | 98 | -> | Plus |
2L | 13809035..13809064 | 202..231 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:51 Download gff for
MXO03023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13808809..13808967 | 43..201 | 98 | -> | Plus |
arm_2L | 13809035..13809064 | 202..231 | 100 | | Plus |