MXO03025.5prime Sequence
663 bp (663 high quality bases) assembled on 2007-05-24
> MXO03025.5prime
CAGTCGACATGCCAAAGAAAATGGGAATCAACTCGAAGGCGGTGGAGGCC
CGCGAGCGCAAGGAGGCCACCAAGAAGGCCACGCAGGAGAAGAAGAGCAA
GGAGGCGGAGGATCGCCTGTGGCGCGATGACGACAAGAATCTGGCCAAGA
AACAACAGCGCAAGGACGAGGAGGAGCGCAAGCGGGCGGAGGCGGCCAAA
CGGAAGGCTGAGGCCAAAGCGCTGCTTGACCAGGAAATGTCATCCATTAA
CACGCAGCGAAAGCAGCCGCTGGCCAAGATCAACCGCCAGATGATTCTCG
AGGAGATGGAGAAGAAGCAGCGCGTAATCGAGGCGATAAACGAGGCCAAC
AAGCCGATGGCCGCGCGAGTGGTGGTCCAAAACCATATCGAGGAGAATCT
GAACCGATCCATGGCCGACACGGATGTGGCATCCAACATTGACGAGGCCA
TCGTGGTGCTCAGTGTAAATGACAGCGAAGAGGACAAGCATCCCGAGAAG
CGAATGCGCGCCGCCTACAAGACCTTTGAAGCCAACAATCTGCCCCGCAT
TAAGGCTGAGAATCCTTCCCTTCGCATGTCCCAGTGGAAGCAGCTTCTGA
TGAAGGAATGGAACAAGTCACCAGACAACCCATTCAACCAGGCGCGCGCA
AGCTTTCTAGACC
MXO03025.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:23:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6013-PA | 642 | CG6013-RA | 1..639 | 9..647 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6013-RA | 844 | CG6013-RA | 69..707 | 9..647 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19031571..19032025 | 9..463 | 2275 | 100 | Plus |
| 3R | 32079331 | 3R | 19032087..19032272 | 462..647 | 930 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:38:39 has no hits.
MXO03025.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:23:54 Download gff for
MXO03025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6013-PA | 1..642 | 9..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:59 Download gff for
MXO03025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6013-RA | 39..685 | 1..652 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:08 Download gff for
MXO03025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6013-RA | 65..711 | 1..652 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:08 Download gff for
MXO03025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19031567..19032025 | 1..463 | 99 | -> | Plus |
| 3R | 19032089..19032276 | 464..652 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:59 Download gff for
MXO03025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14857289..14857747 | 1..463 | 99 | -> | Plus |
| arm_3R | 14857811..14857998 | 464..652 | 98 | | Plus |
