MXO03027.5prime Sequence
832 bp (761 high quality bases) assembled on 2007-05-24
> MXO03027.5prime
CAGTCGACATGGACAGCGAGTCGTTGGCCTGTTCGTCGGTGGAGAAGGAC
CTGACCCGAGTGGTCAGCAAACTGGAGCAGCTTCACGAGAACGCAGAGGC
GGACATCGGAGATATAGCCACACAGATGTCGGAGCTGGTAGAGGTTCTCA
GCAGGGCGGAGCAGCTGGTGACCACTCTGAACTCGAGCACCCAGGTGTCC
CAGGACGATCCCATGGGCGATGCGGTGAGCATGCAGGTGGAGACGGAACC
GACGGCACCACAACGCCTAACCGAGCGCCAAGTGGAGAGCGTCCGGAATG
CTCTCGCCAGGTGCCACGAGCGCGTGCAAAAACTGTCCACGGAGCACCGC
GATCTGCACGGCTCCATTTCGAAGATCGGCAAGGCCATTGACCGCAACTT
TAGCGCCGACTTCTCGTCCACCATGCGAGTGGACGTGCTGCAGGACGAGG
AGAACCTGATGTTGCTGAACAAGGCCATTGCCAAGCATTATTGTCGCCAG
GGCATGGACGATGTGGCTCGCACGCTAATCCGCGAGTGCAAGATGTCGCC
GGAGCATGCCCAGGATGTGTTCGACTCGGAGCGCGAGTTTGCCGACATCT
ACGGCATTTGGGTGAAGATCCAAAAGCGGGATCTGACTGACGCCCTCAAG
TGGGCAAAGATGTACTCCCAGCAGCTGAGTGACCGCCACTCGCTCATAGA
GTTCCGGCTGCACCGCATGCGTTTCATGCAGCTGGTCTCCTACGGATTGG
ACTCGCAGCGCGAGGCCATCTCCTACGCTCGACTGAACTTCAAGAAGTTT
GCTGTGCGCTATGAGCACGAAATAACCAACTT
MXO03027.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:24:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3295-PA | 1299 | CG3295-RA | 1..824 | 9..832 | 4095 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3295-RA | 1853 | CG3295-RA | 247..1070 | 9..832 | 4105 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21016377..21017200 | 832..9 | 4105 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:00:49 has no hits.
MXO03027.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:24:03 Download gff for
MXO03027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3295-PA | 1..824 | 9..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:52 Download gff for
MXO03027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3295-RA | 247..1070 | 9..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:47 Download gff for
MXO03027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3295-RA | 247..1070 | 9..832 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:47 Download gff for
MXO03027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21016377..21017200 | 9..832 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:52 Download gff for
MXO03027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16903882..16904705 | 9..832 | 99 | | Minus |
