MXO03034.5prime Sequence
846 bp (794 high quality bases) assembled on 2007-05-24
> MXO03034.5prime
CAGTCGACATGGCTTCCGAGCCGAGATCCCTAATTCTGCAATTGGACGAC
GACTGTCTGGCCGAGATTTTCGATCGCTTGCAGGACCTGCCGTCGGAAGT
GTCCTTCGCGAGGACTTGCCGGCGAGTGCAGTACATATGTCTGAGCAAGT
GGCGCACCAGCCATGCCTACGAGCAACTGGATCTGGAGAAGTGGCGGGTA
CTGTTGCCCAATCATGAAGACCTGGTCTACTTCCTAACCCAAATGCGTCC
GTACATCAGAGAAATGGGCGGCAGCAGCTGTCTGTGCTCCATTCTAAAAG
ATCTGGACGAAATGCACATTGCAGAGCTGCCCATGGTGACCAGCTTCTAC
TACGACCCAGACGGCGTCGATTGCTATCCCACGAACCGAAGCATCCGCAA
GCTGGCCCGCCTGCTGCCGGGCTTGAAAAAGTTGCGCCTTACCACACCCA
TCGACGGGCGGTACCTATCCAACTTCCAGCACCTGCAGGAGCTGCACCTC
TACGAGGACCAGCACAAGGCGTTTGAGCTGCAGCAGAAGTACCTGGACGA
GGTGTGCCGCACGCTGCACGATCTTCGGGTCCTGGACATTAGGACGTACG
ATATGATCAGTAAACTTCAGCTGGGAAACTGCCTGCAGAGCTTTAAGAAC
CTCACTGATCTTAAGCTCAATCTGGCCACCTTGAAACCCATTCTACCCGC
CGTTCTGGAGCTGCCCTCCCTCACGAAACTGGTGGTGCTGCTGGACAACG
AGTGGCATATCCCCCCGCTGGTCAGTCCGGATAGCTATGACCACAAGATC
CGCGAGGTCAGCGAGTTCTACGAGATCTTGGCTTTCAAGGCCAAGG
MXO03034.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:24:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7148-PA | 1365 | CG7148-RA | 1..838 | 9..846 | 4140 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7148-RA | 1594 | CG7148-RA | 157..995 | 8..846 | 4165 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21831546..21832097 | 559..8 | 2760 | 100 | Minus |
| 3L | 28110227 | 3L | 21831200..21831487 | 846..559 | 1410 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:32:41 has no hits.
MXO03034.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:24:30 Download gff for
MXO03034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7148-PA | 1..838 | 9..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:47 Download gff for
MXO03034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7148-RA | 151..995 | 1..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:19 Download gff for
MXO03034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7148-RA | 151..995 | 1..846 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:19 Download gff for
MXO03034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21831200..21831486 | 560..846 | 99 | <- | Minus |
| 3L | 21831546..21832102 | 1..559 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:47 Download gff for
MXO03034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21824300..21824586 | 560..846 | 99 | <- | Minus |
| arm_3L | 21824646..21825202 | 1..559 | 99 | | Minus |
