MXO03035.5prime Sequence
852 bp (818 high quality bases) assembled on 2007-05-24
> MXO03035.5prime
CAGTCGACATGAAGCGACTCCTAAACCCTACTAGACTGAGACTGGATTGG
TTGAGACGAAGCTCTATAGATGTGACGACTGCTCCCCATGTTCCTGTGCT
CTGCGACACCGCCATTGAATACCTGCAGCCCGTTCCAGGAGGCACCTACT
TCGACATGACTTTCGGAGCTGGTGGCCACACGCGGCGTCTTCTGGAGAAG
TGTCCCGAGGCAAAGGTATACGCCCTAGATCGAGATCCATTGGCCCACCA
ACTGGCCCGCGATATGAGCGAATCCGAAGAGTTCAAGGGTAGGCTGATTC
CCCTGCTTGGAAAATTCTCCGATTTACCAAAGCTTTTCAAAGAACATGGC
CTGGCCAAGAACTCGGTGGACGGGATGCTTTTTGATTTTGGTTGCAGTTC
CATGCAATTCGATGAGGCGGTCAGAGGCTTCTCCATCTCGAGGGACGGTC
CACTGGACATGCGAATGGATGGTGGCCACAGCGGAGGGGTTACAGCTGCC
GATGTGTTGGCTAATGTTGAAGAGGGCGACCTTGTGAAGATTTTAAGGAT
GTATGGTGAAGAGAAAGCAGCCAAGAAGATAGCCAGAGGACTGGTAGACG
CGCGCAACGCCCTCTTTAAAATCGAGACCACCAAGCAGCTGGCAGATATA
ATTGAAAACATCATGGATGGCGGGACCAGGAAGGATAAGCTTCGACGACC
GGCACACTCAGCCACCAAGACCTTCCAAGCCATCCGCATATTTGTGAACA
ACGAACTAAACGAGATCAACTACGGTATGGTTTTGGCCAACGAAATCCTC
CGTGTGGATGGACGCTTGGTGACCATTACTTCCACTCGCTGGAGGACACT
AT
MXO03035.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:24:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-PA | 1071 | CG14683-RA | 1..821 | 9..829 | 4105 | 100 | Plus |
| CG14683-PB | 1071 | CG14683-RB | 1..821 | 9..829 | 4105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14683-RA | 1507 | CG14683-RA | 405..1249 | 9..852 | 4200 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10697874..10698718 | 9..852 | 4175 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:48:55 has no hits.
MXO03035.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:24:35 Download gff for
MXO03035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-PB | 1..845 | 9..852 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:40 Download gff for
MXO03035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 395..1249 | 1..852 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:41:03 Download gff for
MXO03035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14683-RA | 395..1249 | 1..852 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:03 Download gff for
MXO03035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10697864..10698718 | 1..852 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:40 Download gff for
MXO03035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6523586..6524440 | 1..852 | 99 | | Plus |
