MXO03045.5prime Sequence
836 bp (790 high quality bases) assembled on 2007-05-24
> MXO03045.5prime
CAGTCGACATGAGACTGCTGCACAAGACGCTGCTCAGCGGTCTGCTGGTA
GTGGCGTTATTCGCTATTTACGCAGCCGCGCAATCAAAATCGAAGACGGG
ACTCTCGCTGTCGGAAAAAGTACAAAACCTGGTGGACATGAACGCCAAAA
AGCCGCTGCTCCGCTTCAATGGACCCAAGTTTCGGGAGTATGTGAAGAGT
GCACCACGGAATTACTCGATGATCGTAATGCTCACCGCATTGGCTCCATC
GAGACAATGCCAGATCTGTAGGCACGCCCACGACGAGTTCGCCATCGTGG
CCAACTCCTACCGCTTCTCCTCGACTTACTCCAACAAACTCTTCTTTGCT
ATGGTGGATTTCGATGACGGCTCCGAGGTTTTCCAACTTCTGCGCCTGAA
CACCGCCCCGGTGTTCATGCATTTCCCGGCCAAGGGCAAGCCAAAGGGAG
CTGACACCATGGATATCCATCGCGTCGGCTTCGCCGCCGATTCTATTGCG
AAATTCGTTGCCGAGCGAACGGACATCACCATTCGCATTTTCCGTCCACC
AAACTATTCTGGCACCGTGGCCATGATCACATTGGTGGCCCTGGTGGGAA
GTTTTCTTTACATTCGGCGAAATAACTTGGAGTTCTTGTACAACAAGAAT
CTGTGGGGTGCCATCGCAGTATTCTTCTGCTTCGCCATGATCTCGGGTCA
AATGTGGAATCATATCCGTGGACCACCGCTGGTCCACAAGTCGCAAAATG
GTGGCGTGGCCTACATCCATGGCTCCTCGCAGGGCCAGCTGGTGGTGGAG
ACCTATATCGTCATGTTCCTGAATGCCATGATTGTG
MXO03045.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:25:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7830-PA | 993 | CG7830-RA | 1..828 | 9..836 | 4140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ostgamma-RA | 1245 | CG7830-RA | 124..951 | 9..836 | 4140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8307147..8307875 | 822..94 | 3645 | 100 | Minus |
| 2L | 23513712 | 2L | 8307983..8308069 | 95..9 | 435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:24:22 has no hits.
MXO03045.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:25:04 Download gff for
MXO03045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7830-PA | 1..828 | 9..836 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:10 Download gff for
MXO03045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ostgamma-RA | 117..951 | 1..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:35 Download gff for
MXO03045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ostgamma-RA | 117..951 | 1..836 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:35 Download gff for
MXO03045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8307147..8307873 | 96..822 | 100 | <- | Minus |
| 2L | 8307983..8308073 | 1..95 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:10 Download gff for
MXO03045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8307147..8307873 | 96..822 | 100 | <- | Minus |
| arm_2L | 8307983..8308073 | 1..95 | 95 | | Minus |
