MXO03049.5prime Sequence
794 bp (735 high quality bases) assembled on 2007-05-24
> MXO03049.5prime
CAGTCGACATGAAGTGCTACATCTTGGCTGCCCTGTTGCTGGCCACACTA
GCCAGCGGTGAGAACATCTTCAAGATCAACATAACTCCCGAGGAGGCGCA
GCAATTCCTTAACAGCGCCCAACTGCGTGGCATTGGCGACATCGAGTATG
CCCCGAAAACCGGTGAGAATCCCCTGCCCGAGGCGCGCAACGAGAAGGGA
GAGTTCGTCTACATGGGTCGTGTGATCGAGCATCCCGAGGAGTATGTGGA
GGAGCACTACGATGCCCATCAGTATCATGGTCAGGATGGTTTGGGTCAAT
TTGCCTATGGCTATAGGGATTGGAACCAGGGCAAGAACGAGAAGCGCGAT
GAGACGGGCAAAGTGACCGGATCGTACAAGTATGTCCAACCACATGGCCG
TGACTTTGTGGCCAACTATTATGCTGATAAGACCGGTTTCCATGTGGAGG
ACAATCGTCCGGCACACCTTAAACTGCCGGCCACTAAGACTCCGGCTGTC
CTCAAGGCCGAGGAGGAGCACTTCAAGCTGTGGGGTGAGCTGGCCGCCGC
CGCTGGCCACAATCCCGATCCTTATGCCGCCGAGTACCAGCAGGAGGGTC
GCTACCAGCCCACTGAGCCCGAGTACCAGCCCTACGTGCACGAGGAGCCG
CCATATGTGCCCGGACCCGAGGAGACCGGCGAGCCCAAGGGCTTCTTCTA
CGCCTTCGACTACAATGTCCCCCTGTTGCGCAACAAGGAGGAGCGTGCCG
AGCTCGAACGCCTGCGTGCCATCAACAACAAGGATGAGGCAAGC
MXO03049.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3672-PA | 783 | CG3672-RA | 1..780 | 9..788 | 3900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67B-RA | 1010 | CG3672-RA | 93..872 | 9..788 | 3900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9405289..9406036 | 41..788 | 3740 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:42:20 has no hits.
MXO03049.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:25:19 Download gff for
MXO03049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3672-PA | 1..783 | 9..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:20 Download gff for
MXO03049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 83..876 | 1..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:33 Download gff for
MXO03049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 83..876 | 1..794 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:33 Download gff for
MXO03049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9405290..9406040 | 42..794 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:20 Download gff for
MXO03049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9398390..9399140 | 42..794 | 99 | | Plus |
