MXO03050.5prime Sequence
868 bp (748 high quality bases) assembled on 2007-05-24
> MXO03050.5prime
CAGTCGACATGGATTCTCCCACAACCGAAACGACACCGCCTCCACCCACG
CTATCTGGTCCATTCGTTGGGGCTATTGACGAGGGAACCACTTCCGCGCG
ATTTATTATATTTCGTGCGGGCACTGACGAAATTGTGTGCTTTCATCAGA
TTGAAGTGGAGTCTATTTTCCAGAAGGAGGGATGGTGCGAGCAGGATCCC
ATGGCCATAGTGAATACGGTCAACGAGTGCATCACCGGTGCCTGCAAGAA
ACTTGTGGCCGTGGGCGGGAAGGTTGAGGAAATAATCACGATTGGAATAA
CAAACCAACGCGAGTCCACAGTCGTATGGGATAGAAACTCCGGCCAACCG
CTGGTGAACGCTATCATCTGGCTAGACAATCGTACCACCAGCACGGTGGA
GGAGCTTTTGGAGACTATTCCGAACAATGCCAGGAACATCAACTACCTGC
GCCCATTGTGCGGACTTCCTCTGTCTCCGTACTTTTCGGGCGTGAAACTA
CGCTGGCTTCGAGACAACGTGCCGGTTGTCAGCCAGGCTATGGAGAAGGG
CACGGCCATGTTTGGCACCATCGACACCTGGCTAATGTATAATCTTACGG
GCGGGAAGGACTGTGGTGTCCACAAGACGGATGTGACCAACGCTTCGCGC
ACTATGCTCATGAACATCGAGACCCTTCAGTGGGATGCCAACTTGCTAAA
GTTCTTTGGGCTGCCCAAGACCATTTTGCCGGAGATCTGCTCGAGCTCAG
AGTTCTATGGCAGCATTGCGCAGGGCGTTCTGCAAGGCATAAGCATAACA
TCGGTTCTGGGCGACCAGCAAGCCGCTCTAGTGGGTCACAATGCCTGGCC
AAAGGTCAGGCCAAAGCC
MXO03050.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:25:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18374-PA | 1617 | Gyk-RA | 1..830 | 9..838 | 4125 | 99.8 | Plus |
| CG18374-PB | 1425 | Gyk-RB | 1..638 | 201..838 | 3165 | 99.8 | Plus |
| CG18374-PA | 1617 | Gyk-RA | 831..861 | 838..868 | 155 | 100 | Plus |
| CG18374-PB | 1425 | Gyk-RB | 639..669 | 838..868 | 155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gyk-RA | 1933 | CG18374-RA | 208..1068 | 9..868 | 4265 | 99.8 | Plus |
| Gyk-RB | 1713 | CG18374-RB | 144..841 | 172..868 | 3450 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 203029..203621 | 868..277 | 2900 | 99.7 | Minus |
| 3L | 28110227 | 3L | 205367..205637 | 279..9 | 1355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:18:07 has no hits.
MXO03050.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:25:24 Download gff for
MXO03050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18374-PA | 1..861 | 9..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:56 Download gff for
MXO03050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gyk-RA | 208..1068 | 9..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:09 Download gff for
MXO03050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gyk-RA | 208..1068 | 9..868 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:09 Download gff for
MXO03050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 203029..203619 | 279..868 | 99 | <- | Minus |
| 3L | 205368..205637 | 9..278 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:56 Download gff for
MXO03050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 203029..203619 | 279..868 | 99 | <- | Minus |
| arm_3L | 205368..205637 | 9..278 | 100 | | Minus |
