MXO03051.5prime Sequence
732 bp (732 high quality bases) assembled on 2007-05-24
> MXO03051.5prime
CAGTCGACATGGCCGACGATTGGGAATCCGCAGCAGACAGCGAGGTGGTC
ATCCGGCCGACTGCCGCCGCCAGCGTAAACAAGTGGGAGGGCGAGGACGA
GGATGAGGACATCAAGGACAGCTGGGAGGATGAGGAGGAAAAAAAGGACG
AGGAGAAGCCTACGAAAACAGAAGCACCAGCCAAACCGAAGCCAAATAAG
GCGCTAAAAGCCAAACTGGAACAGCAGGCGCTCCTAGAGGAGGAAGCGGA
GGCAAAACGTTTGGCCAACCTATCGCCTGCAGAAAAGTTGGCTGAGAAGC
TGCGATTGCAAAAAATCCAGGAGGCCTCTGATCTCAAGCATGCCCAGGAA
GCGTTCGGTGTGACGAGTACGTGCGGAGGTCTTGACGCCTTCAACCCCGA
GACCAAGGAGGAGTTCAAGGAATTTGGCGCAACGCTCAGCTGGAAGGTGG
GCCAATTCCGCGAGTCGGAGCACTTCCCCCAATTTGTTGAGGATCTGGTG
CGCAGCCTATGCGTGAATCTGAGCGCTGCTGACATCAAAAAGGTCAAGAT
GAACGTGGAAATCTTGCACTCGGAAAAGCTGAAGCTGGAAAAGGCCAATG
CTAAAAAGCCCGCTGGAAAGGGCAAGGGCAAGGTCACTCTCCGCACCGAA
AACGACGACATTGACGGTTACCAAAAGTACGGAAATGACTTCACCGAAGA
CTATGACGACTTCATGGCAAGCTTTCTAGACC
MXO03051.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:25:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12131-PA | 711 | Adam-RA | 1..708 | 9..716 | 3540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adam-RB | 1228 | CG12131-RB | 155..864 | 7..716 | 3550 | 100 | Plus |
| Adam-RA | 1363 | CG12131-RA | 290..999 | 7..716 | 3550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9969918..9970207 | 230..519 | 1450 | 100 | Plus |
| 2R | 25286936 | 2R | 9970272..9970409 | 520..657 | 690 | 100 | Plus |
| 2R | 25286936 | 2R | 9969739..9969854 | 115..230 | 580 | 100 | Plus |
| 2R | 25286936 | 2R | 9969460..9969553 | 24..117 | 470 | 100 | Plus |
| 2R | 25286936 | 2R | 9970474..9970533 | 657..716 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:38:49 has no hits.
MXO03051.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:25:29 Download gff for
MXO03051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12131-PA | 1..711 | 9..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:05 Download gff for
MXO03051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adam-RA | 285..1003 | 1..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:12 Download gff for
MXO03051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adam-RA | 285..1003 | 1..720 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:12 Download gff for
MXO03051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9970272..9970408 | 520..656 | 100 | -> | Plus |
| 2R | 9970474..9970537 | 657..720 | 96 | | Plus |
| 2R | 9969461..9969552 | 25..116 | 100 | -> | Plus |
| 2R | 9969741..9969854 | 117..230 | 100 | -> | Plus |
| 2R | 9969919..9970207 | 231..519 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:05 Download gff for
MXO03051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5857979..5858042 | 657..720 | 96 | | Plus |
| arm_2R | 5856966..5857057 | 25..116 | 100 | -> | Plus |
| arm_2R | 5857246..5857359 | 117..230 | 100 | -> | Plus |
| arm_2R | 5857424..5857712 | 231..519 | 100 | -> | Plus |
| arm_2R | 5857777..5857913 | 520..656 | 100 | -> | Plus |
