MXO03070.5prime Sequence
819 bp (742 high quality bases) assembled on 2007-05-24
> MXO03070.5prime
CAGTCGACATGGCGGTACTCTGGTGGTTGCTCTCGTTGCAGGTGGTGCTG
ATCTTACCGCCCAGTTACCACCTGGCCACGCCCTCCTCCGGGAGCGGTCA
ATTGCGTCGTCTTTGGCTGCAGGATCATTGCAGTGCGGGAATTTGCACGA
ATGTCGTGATTGGTCGCAGTGATTATGTGATCCTATCACAGGCCCCCATT
GGGGGCACCACCATGCTCACCTTTCTGAACTCGAGCATTGCCAAGATACC
GCATTTGTTGTTCGACACCTTTCCGGATCTACAGGTTCTGCGCATGGAAA
ACTGTTCGCTGGAAACTTTCGAAAAACCGCAGTTTGAAGGTGCCAGCAAT
CTGATGAGCTTGTTCTTGGGATATAATCGCCTGAAGGATATACCTAAGAA
TATATTCTTGGGCGCAGACAATCTGGCCACATTGCATCTGCAAGGAAATC
AGTTGAAGCAGCTGGGAAATCATAGTTTCCATGCCTTGAAAGAAGTGAAG
GAACTTTCGCTGGCGGAAAATCAACTTGAGCAAATTTCTCTAGGAGTTTT
TAGCGGCATGAGGAAACTAATGGACCTAAATTTGGCTGGCAATCGATTAG
ATGCTCTACCAAGAGGCGTCTTCGATCGGAATTTAAACCTTACCAAACTA
AATCTGGCCAGAAACCGGTTCACCGCCTTCGAATCGGAACTGTTGAAGCT
GCAGCCAGTATTTACGCAGTTGGATATTTCTGGAAATATCTTCCAAGAGT
TAACACTCAACTTTACCATGCTGGATGTGGCTATAGCTCATAGTTGCGAT
TTGAGGAGGTTGACCGTCT
MXO03070.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:27:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11910-PA | 1416 | CG11910-RA | 1..811 | 9..819 | 4030 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| alrm-RA | 1717 | CG11910-RA | 109..920 | 8..819 | 4045 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25381862..25382673 | 819..8 | 4045 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:25:42 has no hits.
MXO03070.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:27:04 Download gff for
MXO03070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11910-PA | 1..811 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:25 Download gff for
MXO03070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alrm-RA | 101..920 | 1..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:14 Download gff for
MXO03070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alrm-RA | 101..920 | 1..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:14 Download gff for
MXO03070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25381862..25382680 | 1..819 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:25 Download gff for
MXO03070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21207584..21208402 | 1..819 | 99 | | Minus |
