MXO03072.5prime Sequence
922 bp (737 high quality bases) assembled on 2007-05-24
> MXO03072.5prime
CAGTCGACATGATTCTTCGCGATATGGGAGAAGCCACAGTGAGAGCTGCA
CTGTTAGCGGTTTTGGGAATCCTGCTGATCGCGGGCTGTGATTGCAGCCA
GCGGTTCAAGTACGAGATCAAGGAGTTCCAGGTGCCGCTGGACCATTTCA
GCTTCCTGATCAACGCCACCTTCAACATCCGGTACTTGTACAACGACTCG
TTCGTGGACAAGAGCAATGCCCGCACCCCGATTTTCTTCTACACGGGCAA
CGAGGGGGACATCGAACTCTTCGCCCAGAATACCGGATTCCTGTGGGAGC
AGGCGGAACGACAGCGGGCTCTGGTGATCTTTGCGGAGCATCGTTACTAT
GGAAAGTCATTGCCCTTCGGTAGCTCCACGTTCAACACCAGCCTGCCGGA
GCACTTGGCTTACTTCACAGTGGAGCAGACGCTCGAGGACTACGCCATGC
TGATCACGTTCCTGCGGAACGATCGCCAGATGCCCGTGGTGGCCTTCGGG
GGCTCCTATGGCGGAATGCTGGCCGCCTGGTTCCGGATGAAGTATCCGCA
TTTGGTCAACGGAGCCCTGGCAGCCTCGGCGCCCGTTCTGCAGTTCCCCG
GGATAACCGATTGCGACATCTTCTACAGGATTGTGACATCGGTGTTCCAG
AATGCCTACAACGAAAACTGCACCTTGAATATTGCCAAGTCGTGGAAACT
CTTCGAGACTCTGGGCGCCAGCGAGGCCGGCAAGAAGCAGATATCGGATG
CATTCCACCTATGCAATGCCCTGAAGAACGACGACGATCTGAAGAAGTTC
CTGGACTACGTGGAGGAGGTGTACAGCAATCTCGCCATGGTCAATTACCC
GTACCACAGCAGTTTCCTGGCCCCATTACTGCCTATCCCGTGAGGANGTG
TGCTACTACCTGAAGGAGCTGC
MXO03072.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:27:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2493-PA | 1428 | CG2493-RA | 1..871 | 9..879 | 4330 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2493-RB | 1677 | CG2493-RB | 75..990 | 9..922 | 4504 | 99.6 | Plus |
| CG2493-RA | 1860 | CG2493-RA | 75..990 | 9..922 | 4504 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20462455..20463370 | 922..9 | 4454 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:59:43 has no hits.
MXO03072.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:27:15 Download gff for
MXO03072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2493-PA | 1..916 | 9..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:26 Download gff for
MXO03072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2493-RA | 67..990 | 1..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:17 Download gff for
MXO03072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2493-RA | 67..990 | 1..922 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:17 Download gff for
MXO03072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20462455..20463375 | 1..922 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:26 Download gff for
MXO03072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20462455..20463375 | 1..922 | 99 | | Minus |
