MXO03079.5prime Sequence
696 bp (696 high quality bases) assembled on 2007-05-24
> MXO03079.5prime
CAGTCGACATGTCGAGCTCTGGAATTGTACTCTATGGGACAGATCTCAGT
CCCTGTGTGAGGACCGTCAAACTTACCCTAAAGGTCCTGAATCTGGACTA
CGAGTACAAGGAGGTGAATCTTCAGGCGGGCGAGCACCTGAGCGAGGAAT
ATGTGAAGAAGAATCCCCAACACACGGTACCGATGCTCGATGATAATGGC
ACTTTCATCTGGGACTCCCATGCCATTGCCGCCTACTTGGTGGACAAGTA
TGCCAAGTCGGATGAGCTGTATCCCAAGGATCTGGCCAAGCGTGCGATCG
TCAATCAGCGTCTCTTCTTCGATGCCAGTGTAATCTATGCCAGTATAGCC
AATGTCAGCCGCCCGTTTTGGATAAACGGTGTTACCGAAGTGCCCCAGGA
AAAACTGGACGCCGTACACCAGGGTCTGAAGCTGCTGGAGACGTTCCTGG
GCAACAGCCCCTACCTGGCCGGCGATTCGCTAACCCTAGCCGATCTGTCC
ACCGGACCCACTGTAAGCGCCGTGCCCGCTGCCGTGGACATAGATCCTGC
TACATATCCCAAGGTCACCGCCTGGTTGGATCGCCTCAATAAGCTGCCCT
ACTACAAGGAGATCAACGAAGCTCCGGCCCAGAGCTACGTCGCCTTCCTG
CGCAGCAAGTGGACCAAGCTGGGCGACAAGGCAAGCTTTCTAGACC
MXO03079.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:27:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5164-PA | 675 | GstE1-RA | 1..672 | 9..680 | 3360 | 100 | Plus |
| CG17523-PA | 666 | GstE2-RA | 227..274 | 238..285 | 165 | 93.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE1-RA | 831 | CG5164-RA | 39..711 | 8..680 | 3365 | 100 | Plus |
| GstE2-RA | 890 | CG17523-RA | 121..355 | 94..328 | 305 | 75.3 | Plus |
| GstE10-RB | 1134 | CG17522-RB | 451..574 | 159..282 | 245 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18398431..18399103 | 8..680 | 3365 | 100 | Plus |
| 2R | 25286936 | 2R | 18399606..18399840 | 94..328 | 305 | 75.3 | Plus |
| 2R | 25286936 | 2R | 18397198..18397321 | 282..159 | 245 | 79.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:33:22 has no hits.
MXO03079.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:27:48 Download gff for
MXO03079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5164-PA | 1..675 | 9..683 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:06 Download gff for
MXO03079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE1-RA | 32..718 | 1..687 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:35 Download gff for
MXO03079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE1-RA | 32..718 | 1..687 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:35 Download gff for
MXO03079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18398424..18399110 | 1..687 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:06 Download gff for
MXO03079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14285929..14286615 | 1..687 | 98 | | Plus |
