MXO03083.5prime Sequence
597 bp (597 high quality bases) assembled on 2007-05-24
> MXO03083.5prime
CAGTCGACATGTCTAGATTGTTCCTGCCCGTCTTGGCCATTGTGCTGGTC
TCCATCGGAGCTTCGCATACAGCCAGCTTGGAGTGGCCCTCGAATCTTGT
GGCTCTCAGTTCGGTCAAGTCCTCGCAGCTGCTTCCGATTGCCAGCGAGG
ATTCCGTTGAGTTGGCCGATGGCAGTTCGGGGTCCGTCAGCTCATCCGCT
GCCCAGCCGGAAGATCAATCCCAGGAGGAGGCGGAAGAGCAACAGGTCTC
CTCCGCATCCAGTGGCAGTGCCGATCCGATTAGTGGCCGTCTTGTCTCTG
CCGGAATTCCCGTCTCTGTGCCTCTTCCTCTGATCCTGGCCGCTCGTAAT
GGACTACGAACCGTATTGACCATCCAGGAGCCAGCCGTGGCCAAGGTGGG
CGAGGTGGTGCAGCACGTGCCCACTGCCGTTTCGCATCAGACCCAGACGG
TGGTGCACGATCACCGCCGATTGGTCACACCCATTGTGGCACCCGCTGTT
CGCACCACCCAGGTGATTCGCCAGCAGCCACCACTTCTGTGGAGCGTGGC
CTCCGATCCCCGAGTGGTTCTCATCCGCAACGCAAGCTTTCTAGACC
MXO03083.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:28:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13057-PA | 576 | retinin-RA | 1..573 | 9..581 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| retinin-RA | 798 | CG13057-RA | 47..620 | 8..581 | 2870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16332050..16332611 | 20..581 | 2810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:25:49 has no hits.
MXO03083.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:28:11 Download gff for
MXO03083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13057-PA | 1..576 | 9..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:27 Download gff for
MXO03083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| retinin-RA | 47..624 | 8..586 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:16 Download gff for
MXO03083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| retinin-RA | 47..624 | 8..586 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:16 Download gff for
MXO03083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16332051..16332615 | 21..586 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:27 Download gff for
MXO03083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16325151..16325715 | 21..586 | 99 | | Plus |
