MXO03091.5prime Sequence
870 bp (795 high quality bases) assembled on 2007-05-24
> MXO03091.5prime
CAGTCGACATGGACGAGGAATTCTCTAATCAGCCCATCGATCCAAGCATC
GCTCGGAGTGACTACTCCCGGAGTCATTTCGTTAACCAGAGCTCCATGAC
ATTGAGTCGCGGATTGGACTCCACCCGACTGCTTTTCGTAGGCGAAAACT
TCCAGCAGACGCGCAGCGAACAGGACTTATTTTACGACTGTCAAGGTCCG
GGTGAGGACTCGCCAAAGGAGGGCCGTAGTGCCACCAGCCGGTGCAAGTT
CGATGATCCGGCTGCGATACGGGATGCCCTGGAACGGGCGGCCAATGCCA
CACAGATGCTACTCAAGAATTTTGACAAGTCAGGTGGTTGGAATCAGCCA
TGTGCCGTCACCCTGGAGTTGACCGCTCGGTTGGTGGACCCCAAGAAGGG
TCGCGCTGGTTGTCCGTTGCACGGAAAGCCCGTCACCGTCCAGATGCCGC
TGGAGTTCAATCCGCAGAGCGGCAAGATGGTCAAGTGTCAGCAAAAGAAA
CAACCGGTCACCAGGCATCGCAAAGAGTCCATCTGCCAGTGCCGCTCGCA
GCAGTATATGCGTTCCGGTCCAAGGGCTCCAAAGCCCAGCTCAGGTAAAT
CCGCCAGCAAACACTTTCGTCCATGTGCATCGCAACAGCTAGCCGAAGGG
TCCGCCAGTTCGGTATACATAGGAAGCTGTGGGGATTCAACATCTCAGTG
TAACCGTTGCACTCCGGCCACATGTTGCCGCTGGCACGACCCGGGGGCAC
GGGAGGTCATCTCAATCTCCTGCCTGACCTTGCCGGATATCGAATCAGAG
CTCACTCTTACCCCAGTGCCTGAGCCACTGCCAATTGAAGAACCGTTGGT
GGAGATAGAACCAACGGCCC
MXO03091.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:28:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33191-PA | 1431 | CG33191-RA | 1..862 | 9..870 | 4310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33191-RA | 1545 | CG33191-RA | 88..949 | 9..870 | 4310 | 100 | Plus |
| Pif1B-RB | 4148 | CG33720-RB | 96..681 | 9..594 | 2930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8778975..8779836 | 870..9 | 4310 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:39:14 has no hits.
MXO03091.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:28:53 Download gff for
MXO03091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33191-PA | 1..862 | 9..870 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:25 Download gff for
MXO03091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33191-RA | 81..949 | 1..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:24 Download gff for
MXO03091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33191-RA | 81..949 | 1..870 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:24 Download gff for
MXO03091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8778975..8779840 | 1..870 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:25 Download gff for
MXO03091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4604697..4605562 | 1..870 | 99 | | Minus |
