MXO03094.5prime Sequence
853 bp (780 high quality bases) assembled on 2007-05-24
> MXO03094.5prime
CAGTCGACATGACTCAGTTAAGCGAGTTCGCCCTGGACAGCCACTTTGCC
TCCGAGCTGCGCAGCCTGCAGTTGTATTCCAAGGAGCACCCTGTCAGCCA
AGATGACCACGACATAAGTCAGCGTTGGATGCAGCACTTCCAAAACGCCA
AGGGTTTGGATAAATTCGCACGAAACTGCATGCTGCTGATGATGTGCGAA
CAGTTGCGAGATCTTGGCCACTTGAGCAAACCCTTCACCGAACTGAAGAA
CTTGAGTCGCCCCATGGACGATTTGCTGAACGAGTACCATGGGACGACTA
CTGTGGAGGAGGGGCAAATGTCGCCGGTTGAAGATATTGAGGACTCGGAC
ACCAATGTCTCCAACTATGGCAGTGGCAGTAGTTCTTTCTCCCCTGGGGT
GCCCTATCCCATTTCCACGCCCGAGTTCGAGAGCATTAAGCGGTCTAACC
AGGATCTGCTTAAGGAAATCGACTCGCTGCACTGTCGCACGGTGGAAGCG
GAAAAGCTATACCTTAGCAGGAGCCAAATTCTGGAGAAGCAGATTGCCGA
GAAGTCGGCGTTGGCCAAAACGAAACTTCCCCAGGAGGGTATCTATCAAT
CCTGCCGTGCGGCCTGCCAGCTTCTGAAAAAATGGCCAGGCGAGTCAGTG
CGACTCAATTTTCTGACCACCTGCCTGGAGCCCTTTCTGCGGAACGATAT
GATCACCAGCTTGCAGATCTCCGAGTTGGATCTCAGTTTCGAGAATACTC
TGAATGCCATGGTGAAACGGGCCTGCTCGCGAAGGGACGACAATGTCCGC
ATGCTATATGACCAAATTTTGTGCCAGGAAAAGAACGACCTGAAGGAGAA
GGA
MXO03094.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:29:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-PA | 1170 | CG7366-RA | 1..845 | 9..853 | 4225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-RA | 1340 | CG7366-RA | 92..936 | 9..853 | 4225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8201482..8202326 | 853..9 | 4225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:26:05 has no hits.
MXO03094.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:29:08 Download gff for
MXO03094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-PA | 1..844 | 9..852 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:37 Download gff for
MXO03094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 87..935 | 1..852 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:25 Download gff for
MXO03094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 87..935 | 1..852 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:25 Download gff for
MXO03094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8201483..8202331 | 1..852 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:37 Download gff for
MXO03094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8194583..8195431 | 1..852 | 99 | | Minus |
