MXO03102.5prime Sequence
826 bp (788 high quality bases) assembled on 2007-05-24
> MXO03102.5prime
CAGTCGACATGACGCCCCATATGTGCTCAGTGGTGAGGTGTTTGCTTGCG
GCCCTAATCCTTGGCCAAGTGCAAGCCGAGCTGGATTTTAACAACGATCT
CGAAAACAGTCAAAAGTTCAAGAGCATACCAACCACAGTGAAAACCTATG
AGAACGATACAGTGCAGCTTCCGTGCACCTTAAACACTCCCTTCCGCTAC
GTCCGTTGGCATCGGGACGATGTGGCTCTGGTGGACTCCAGACACCCGGA
GCTCCCGCCGCCGGATCGCATAATGCTCTGGCCGAATGGCAGCCTGCAGG
TGGCCAACGTGCAGTCCAGTGACACCGGGGACTACTACTGCGAAATGAAC
TCGGATTCGGGTCATGTGGTCCAGCAGCACGCCATCGAAGTGCAATTGGC
TCCACAGGTGTTGATTGAACCATCGGATCTCACGGAGCAGCGGATAGGTG
CAATCTTCGAGGTGGTGTGCGAGGCCCAGGGAGTGCCCCAACCGGTCATC
ACCTGGCGGTTGAACGGCAATGTCATCCAGCCACAGAGCAACACGGGGAA
TCGGCAAAGCCTCATCCTGGAGATCAAATCGAGGAACCAGGCGGGCCTCA
TAGAATGCGTGGCCAGCAATGGAGTGGGTGAGCCAGCGGTGGCCAATGTC
TATCTCCATGTGCTATTTTCGCCCGAGGTGAGCATACCCCAACCCGTGGT
GTACACCAAACTGGGCTCCCGTGCCCATCTTGAGTGCATTGTGGAGGCGG
CACCGGCGGCCACGGTTAAGTGGTTCCATCACGGACTGCCGGTGGCACTG
GGAGCCCACTCCACCACTCACGAGTC
MXO03102.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:29:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10382-PA | 1503 | wrapper-RA | 1..818 | 9..826 | 4090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wrapper-RA | 1977 | CG10382-RA | 166..983 | 9..826 | 4090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:00:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22380852..22381331 | 187..666 | 2400 | 100 | Plus |
| 2R | 25286936 | 2R | 22379802..22379979 | 9..186 | 890 | 100 | Plus |
| 2R | 25286936 | 2R | 22381400..22381559 | 667..826 | 800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:00:14 has no hits.
MXO03102.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:29:25 Download gff for
MXO03102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10382-PA | 1..818 | 9..826 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:44 Download gff for
MXO03102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wrapper-RA | 166..983 | 9..826 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:27 Download gff for
MXO03102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wrapper-RA | 166..983 | 9..826 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:27 Download gff for
MXO03102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22379802..22379979 | 9..186 | 100 | -> | Plus |
| 2R | 22380852..22381331 | 187..666 | 100 | -> | Plus |
| 2R | 22381400..22381559 | 667..826 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:44 Download gff for
MXO03102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18267307..18267484 | 9..186 | 100 | -> | Plus |
| arm_2R | 18268357..18268836 | 187..666 | 100 | -> | Plus |
| arm_2R | 18268905..18269064 | 667..826 | 100 | | Plus |
