Clone MXO03111 Report

Search the DGRC for MXO03111

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:31
Well:11
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG9162-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO03111.5prime Sequence

393 bp (393 high quality bases) assembled on 2007-05-24

> MXO03111.5prime
CAGTCGACATGAAGAAGAAGAGAGCACACACTCATTCACTCACTCACGCA
CACACACAAGTGCAGGCCACGCGCAGCAGAAAGGCAAACAGCGGAAAATC
GAAAAATCAGGCGGCAAGACCGCAACAACTGCAGAGAAGCATGGATGCAG
AGAGGCGGAGTGCCGGGAAGTGCTGTCTAGCTATTATAAGCCGTTCTATA
GTTGGGCGACGGAGTGTGAGCGAGCGAAGTGGTGTGGGGGAGGGGTGCAG
CCAGCATGTGCAGGCGATAAATGCAACGTGTAATGTGGGGAGGCAGTGCA
CGGGTTTTCGACATCCGATGTCCATTGCAAATGGAAGAGGACGTGCAATG
GTTTGCGATGCACGTGTTGGCGGTCAAGCAAGCTTTCTAGACC

MXO03111.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:30:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG9162-PA 372 CG9162-RA 1..369 9..377 1845 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:33:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6078800..6079168 9..377 1845 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:33:33 has no hits.

MXO03111.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:30:06 Download gff for MXO03111.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9162-PA 1..372 9..380 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:40 Download gff for MXO03111.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6078800..6079172 9..381 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:40 Download gff for MXO03111.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6078800..6079172 9..381 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:12 Download gff for MXO03111.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6078800..6079172 9..381 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:12 Download gff for MXO03111.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6078800..6079172 9..381 99   Plus