MXO03124.5prime Sequence
792 bp (761 high quality bases) assembled on 2007-05-24
> MXO03124.5prime
CAGTCGACATGGATAGCTCGGTGCCATCCGGAGCCGAAAGCGGTCTTATC
AAGGAGTACAAGGACTTTGCCAAATGCCTGGACGAACTGGAGTTCAAGAC
CGATGAGCTGCTAATCGATGCTAAAATGGTGGATCAGGAGTTGGCCAACT
GCCACAAGTTTCGCGAGGATCAGCTGCTGAAGCATCTGACGGAGAAGAAC
GACGACGACGAGCAGATGCAGTTGCTGCGGGAAAACATCGAGCTCAAGGC
GACCGGCGTTGAGTTCCAACACGGCATTGAGCTGATCATGGAGAAGTACC
GTGAGCACAGCGAAGGGGACATGTTAATCGATACCTACCAACTGAGGGAG
CACTACCTGGCCGGTTTGTCGAAGGTGGTCGAAGATCATGATGCCCGCAT
CGAGCGTATGGTTGATGTGATGAAGCTAACTGTCGACTTCGAGGACCGGA
GCAGTGCCGAGAACCAGCAGATCATTTGCCAGCTGACTGATGAAAATGAG
CAGTTGCGTCGTCAGTTGCAGATCAGTACCACCGATGAGCTGTTCCGCCA
GGGAGCACTGAGCTCCAACGAAAGTAGCACTCAGATCGGACCAAACGATT
CTTTGGATTCGAGTGCCACCCGGGAGAATAGCATCTACAGCATAGATAGC
TTCCTCTCCTGCCTTTCGCCGAGCAGCGTGGAGGATGATTCGGAGTGCTC
ATCCAACAATTCGCTGCTGAGTGAGCTGGAAGTCACTTGCTTTATTGAGG
AGGCTCTGGCCGAGAAGCCCGATGAGGCAAGCTTTCTAGACC
MXO03124.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:31:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6130-PA | 771 | CG6130-RA | 1..764 | 9..772 | 3745 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| h-cup-RA | 1545 | CG6130-RA | 83..850 | 9..776 | 3780 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15382102..15382869 | 776..9 | 3780 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:48:38 has no hits.
MXO03124.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:31:12 Download gff for
MXO03124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6130-PA | 1..771 | 9..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:01 Download gff for
MXO03124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| h-cup-RA | 80..850 | 5..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:40 Download gff for
MXO03124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| h-cup-RA | 80..850 | 5..776 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:40 Download gff for
MXO03124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15382102..15382872 | 5..776 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:01 Download gff for
MXO03124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11207824..11208594 | 5..776 | 99 | | Minus |
