MXO03127.5prime Sequence
707 bp (437 high quality bases) assembled on 2007-05-24
> MXO03127.5prime
CAATCGACATGATGGGCACACGGGCTGCGGAGCCCCGAGGATCCAGGAGG
TCCTTGGCAGGTCGAAGCATTCAAGAGCTCTCTGTGTGCCAGGAACCCGA
CCCGCTAAACACCTTTTTGGAGAAACCACTTACCCTGTATCAGTGGATGC
GGTGGCGCAACTGCGAGACCCATAAGCCGCACCTAGAGGAAACATACCCC
AGCATTCTACCGCCTATATCCAAATGTGACGATGCCAAGACTCTGAAGTA
CGTTGAAAATGCCATGGAGGCCAACAAATGTAAAGAATACGTCAAGGAAG
ACGTGCTGACCGTGTGGAACTACAGTCCCCAAAAGGAATCCTTGGTGTGG
TATGGCGTTAAATCGCAGTACCCGTCTCCACAGGCCGTCCTCTATGACCG
CGCTTTGAAAAAGAGCCTAAAGGCGGCTAGTCTTGCTCCTAAACCGCCGA
AGAAGTCCAACATAAAACCTAAATGGCAACTTCAGAAGAAGCCCCCCCAA
CCTGGCGCTTTTGTTTTAAATCGAAAATGTCTGAAGGCCAAGCTCGAAAG
GATGCCAAGCATAAAACGCCAACTGAAGTCGAACAATGTCTTCTCCTGGC
TTCACTGTCCTCATCCAGCGGATCCGAGCAATCCTTTTGACGATAGCGCC
GTCTATCCAGCGATCAGCATAGAACAGGCGATGGACATGGCGAAGCCGGA
AAAGCCT
MXO03127.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:31:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31920-PB | 1224 | CG31920-RB | 1..699 | 9..707 | 3320 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43755-RB | 2333 | CG43755-RB | 137..835 | 9..707 | 3390 | 99 | Plus |
| CG43755-RD | 1709 | CG43755-RD | 137..835 | 9..707 | 3390 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 328927..329625 | 707..9 | 3390 | 99 | Minus |
Blast to na_te.dros performed 2014-11-28 20:12:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 3547..3622 | 220..295 | 119 | 61.8 | Plus |
MXO03127.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:31:25 Download gff for
MXO03127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31920-PB | 1..699 | 9..707 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:07 Download gff for
MXO03127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43755-RD | 137..835 | 9..707 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:05 Download gff for
MXO03127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43755-RD | 137..835 | 9..707 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:05 Download gff for
MXO03127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 328927..329625 | 9..707 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:07 Download gff for
MXO03127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 328927..329625 | 9..707 | 98 | | Minus |
