MXO03135.5prime Sequence
827 bp (742 high quality bases) assembled on 2007-05-24
> MXO03135.5prime
CAGTCGACATGAGCTCCTGGAAGGACAGTCTCACGAGCATTCCGGGCACG
GTGGCGCAGTTGATTAACGAGAGCGCCAGCAACCTGTTACACGCCTCATC
CACGCTGGGATCAACAGTTGGCCTTGGAGGCTCTGGCTCCACTGGATCTG
GATCCGAGGCCGGAGGCTCCGAGGAAAGTGGTCCACAAGGTGCGGAGTAC
AGGGCGTTGCCCATTCCCGCGTCCTTGGTGCGCGAGCAATGGCGCCTAAT
CTTCACCAGCGATGCCAATATCCAGGATTTGCAGGCGGCCATCGCCCATT
GCAGAGATCTCGTCCTGCTGAGCGAGGAACTCAGCGAGGAGCGTCGCTGG
TTGGTGCGGCACCTGGTAGATTTGCGATACTCACTGCAGGAGCTGGAGGA
GGCCCAGGAGCAGCATTCCCTATCGTCGGACATGGTAGTTATGAATGCCA
TACGTGCTGTGGTGGGTCATCATTTTGTGCCCCATCACCCGCATCATGGC
AAACGGAATCGTCTGCAGGCAGCCGCCAAGAGGAACTACTGTGACCACTG
CACCACCATTATTTGGAGTGTGGTGCAGAACTCGTACGTGTGCAGCGATT
GCGGATTCCTGGTCCATCAGAAGTGCATCGATGGCGTGAAGAGGGTTTGT
GCCCATGTCCTGGTTTCAGAGCGGCAGCATCCCATTTCGGAGATATGTCC
AGAAATCGGACTCGCCTCCCAGGGATACAAGTGCGCCGAGTGCGGGACGA
TGCTAAATATAAAAAATACCTGGATTGAGCCGCGTCTATGCGACTATAGT
GGATTGTACTACTGCCCTCGCTGCAAC
MXO03135.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:32:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11534-PA | 1479 | CG11534-RA | 1..819 | 9..827 | 4095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11534-RA | 1637 | CG11534-RA | 78..896 | 9..827 | 4095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12132223..12132976 | 9..762 | 3770 | 100 | Plus |
| 3L | 28110227 | 3L | 12133029..12133093 | 763..827 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:49:07 has no hits.
MXO03135.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:32:11 Download gff for
MXO03135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-PA | 1..819 | 9..827 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:46 Download gff for
MXO03135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-RA | 78..896 | 9..827 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:41:11 Download gff for
MXO03135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-RA | 78..896 | 9..827 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:11 Download gff for
MXO03135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12133029..12133093 | 763..827 | 100 | | Plus |
| 3L | 12132223..12132976 | 9..762 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:46 Download gff for
MXO03135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12125323..12126076 | 9..762 | 100 | -> | Plus |
| arm_3L | 12126129..12126193 | 763..827 | 100 | | Plus |
